C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107625 DDX50 9606 + 10:68901278-68946847 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373585 DDX50-001 68901278-68946847 protein_coding
  ENST00000460470 DDX50-004 68913427-68934883 processed_transcript
  ENST00000466265 DDX50-005 68919854-68946553 processed_transcript
  ENST00000471475 DDX50-002 68901317-68913230 nonsense_mediated_decay
  ENST00000483593 DDX50-003 68901286-68913506 nonsense_mediated_decay
  ENST00000610822 DDX50-201 68901289-68946847 protein_coding
  ENST00000612682 DDX50-202 68901278-68946846 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373585ENST00000471475ENST00000610822ENST00000612682
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373585 N/A N/A 0.924±0.00 4.336±0.00 N/A 3.063±0.00 0.757±0.13 N/A 3.094±0.00 N/A 0.898±0.00 4.129±1.93 2.970±1.15 4.787±2.57
ENST00000471475 N/A N/A N/A N/A 3.875±0.00 N/A N/A N/A 2.266±0.00 N/A N/A N/A N/A N/A
ENST00000610822 N/A N/A N/A 1.644±0.00 1.663±0.00 N/A N/A 2.255±0.07 N/A N/A N/A 4.570±0.00 3.676±0.00 N/A
ENST00000612682 8.590±0.00 6.900±0.00 0.948±0.00 N/A 6.090±0.61 15.597±0.00 2.759±1.78 6.527±0.00 2.722±0.51 6.671±0.99 4.204±3.26 6.324±4.26 5.148±0.82 10.721±4.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005730 IDA nucleolus
GO:0005886 IDA plasma membrane
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016787 IEA hydrolase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063626 ddx21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 protein_coding Danio_rerio
ENSMUSG00000020076 Ddx50 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein_coding Mus_musculus

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