C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373585 DDX50-001 ENSG00000107625 9606 + 10:68901278-68946847 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverMuscleOvaryPlacentaTestisENST00000373585
Transcript ID Bladder Brain Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000373585 0.924±0.00 4.336±0.00 3.063±0.00 0.757±0.13 3.094±0.00 0.898±0.00 4.129±1.93 2.970±1.15 4.787±2.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005730 IDA nucleolus
GO:0005886 IDA plasma membrane
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016787 IEA hydrolase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020270 Ddx50-201 protein_coding Mus_musculus 0 3483
ENSMUST00000189949 RP23-230A14.1-001 processed_pseudogene Mus_musculus 0 2920
ENSMUST00000121247 Gm14980-001 processed_pseudogene Mus_musculus 0 625

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