C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: B9 protein domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108641 B9D1 9606 - 17:19337554-19378182 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261499 B9D1-001 19343170-19362713 protein_coding
  ENST00000268841 B9D1-003 19346946-19362669 protein_coding
  ENST00000395615 B9D1-006 19343170-19362576 protein_coding
  ENST00000395616 B9D1-005 19343454-19362733 protein_coding
  ENST00000440841 B9D1-004 19346950-19362542 protein_coding
  ENST00000461069 B9D1-008 19340921-19362614 protein_coding
  ENST00000468679 B9D1-011 19363657-19377905 processed_transcript
  ENST00000476298 B9D1-009 19371236-19378148 retained_intron
  ENST00000477478 B9D1-002 19343170-19378182 protein_coding
  ENST00000477683 B9D1-007 19347199-19362713 retained_intron
  ENST00000487415 B9D1-010 19360321-19377890 protein_coding
  ENST00000574508 B9D1-012 19347280-19363031 protein_coding
  ENST00000575403 B9D1-014 19337554-19378182 protein_coding
  ENST00000575478 B9D1-013 19343768-19362721 protein_coding
  ENST00000582857 B9D1-015 19347291-19362619 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverTestisENST00000261499ENST00000395615ENST00000461069
Transcript ID Bladder Brain Kidney Liver Testis
ENST00000261499 N/A 1.830±0.00 30.148±0.00 7.231±0.00 17.072±0.00
ENST00000395615 N/A N/A N/A N/A 21.012±0.00
ENST00000461069 3.200±0.00 4.328±1.61 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077E CIL_00077E_0002 CGP 17:19215615-19378182

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0001944 IEA vasculature development
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0007224 ISS smoothened signaling pathway
GO:0008158 ISS hedgehog receptor activity
GO:0016020 IEA membrane
GO:0032880 IEA regulation of protein localization
GO:0035869 ISS ciliary transition zone
GO:0036038 ISS TCTN-B9D complex
GO:0036064 IDA ciliary basal body
GO:0042384 ISS cilium assembly
GO:0042733 IEA embryonic digit morphogenesis
GO:0043010 IEA camera-type eye development
GO:0060271 ISS cilium morphogenesis
GO:0060563 IEA neuroepithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011727 b9d1 B9 protein domain 1 protein_coding Danio_rerio
ENSMUSG00000001039 B9d1 B9 protein domain 1 protein_coding Mus_musculus

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