C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B9 protein domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261499 B9D1-001 ENSG00000108641 9606 - 17:19343170-19362713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverTestisENST00000261499
Transcript ID Brain Kidney Liver Testis
ENST00000261499 1.830±0.00 30.148±0.00 7.231±0.00 17.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00077E CIL_00077E_0002 CGP 17:19215615-19378182

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0001944 IEA vasculature development
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0007224 ISS smoothened signaling pathway
GO:0008158 ISS hedgehog receptor activity
GO:0016020 IEA membrane
GO:0032880 IEA regulation of protein localization
GO:0035869 ISS ciliary transition zone
GO:0036038 ISS TCTN-B9D complex
GO:0036064 IDA ciliary basal body
GO:0042384 ISS cilium assembly
GO:0042733 IEA embryonic digit morphogenesis
GO:0043010 IEA camera-type eye development
GO:0060271 ISS cilium morphogenesis
GO:0060563 IEA neuroepithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102657 B9d1-001 protein_coding Mus_musculus 0 736
ENSMUST00000155176 B9d1-002 processed_transcript Mus_musculus 0 398
ENSMUST00000140548 B9d1-003 processed_transcript Mus_musculus 0 339
ENSMUST00000127889 B9d1-005 protein_coding Mus_musculus 0 311
ENSMUST00000138057 B9d1-004 processed_transcript Mus_musculus 0 307
ENSMUST00000146562 B9d1-006 processed_transcript Mus_musculus 0 230

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