C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: contactin associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108797 CNTNAP1 9606 + 17:42682613-42699814 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264638 CNTNAP1-001 42682613-42699814 protein_coding
  ENST00000585534 CNTNAP1-003 42689778-42690921 retained_intron
  ENST00000586801 CNTNAP1-004 42687261-42688578 retained_intron
  ENST00000591662 CNTNAP1-002 42682699-42699139 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264638ENST00000585534ENST00000586801ENST00000591662
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264638 N/A 3.523±0.00 N/A 14.630±12.49 N/A 1.016±0.00 0.573±0.00 N/A 0.114±0.00 0.222±0.00 0.075±0.00 6.120±0.68 0.773±0.00 1.445±0.00
ENST00000585534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.382±0.00 4.821±0.00 N/A
ENST00000586801 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.600±0.00 N/A N/A N/A N/A
ENST00000591662 0.927±0.00 N/A 0.076±0.00 5.689±0.00 0.977±0.00 0.693±0.47 0.029±0.00 0.704±0.00 0.079±0.00 0.193±0.00 0.212±0.00 4.366±2.19 0.962±0.45 0.734±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002175 ISS protein localization to paranode region of axon
GO:0004872 TAS receptor activity
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005515 IPI:IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0007010 ISS cytoskeleton organization
GO:0007155 IEA cell adhesion
GO:0007165 TAS signal transduction
GO:0007411 TAS axon guidance
GO:0008076 ISS voltage-gated potassium channel complex
GO:0008088 ISS axon cargo transport
GO:0009967 TAS positive regulation of signal transduction
GO:0016021 ISS integral component of membrane
GO:0017124 ISS SH3 domain binding
GO:0019227 ISS neuronal action potential propagation
GO:0030424 IEA axon
GO:0030913 ISS paranodal junction assembly
GO:0031175 IEA neuron projection development
GO:0033270 ISS paranode region of axon
GO:0048812 ISS neuron projection morphogenesis
GO:0050884 IEA neuromuscular process controlling posture
GO:0050885 IEA neuromuscular process controlling balance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074524 CNTNAP1 contactin associated protein 1 protein_coding Danio_rerio
ENSMUSG00000017167 Cntnap1 contactin associated protein-like 1 protein_coding Mus_musculus

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