C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: contactin associated protein-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017167 Cntnap1 10090 + 11:101170523-101190724 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000103109 Cntnap1-001 101176041-101190724 protein_coding
  ENSMUST00000138942 Cntnap1-002 101170523-101178316 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103109ENSMUST00000138942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103109 3.189±0.52 5.269±0.34 3.247±1.14 18.932±24.95 2.646±0.18 4.415±0.36 1.249±0.04 1.395±0.13 0.330±0.17 1.268±0.27 0.571±0.00 6.087±1.31 0.385±0.21 0.139±0.08
ENSMUST00000138942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005H5 CIL_0005H5_0002 CGP 11:101155907-101171351

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002175 IMP protein localization to paranode region of axon
GO:0005886 TAS plasma membrane
GO:0007010 IMP cytoskeleton organization
GO:0007155 IEA cell adhesion
GO:0008076 IDA voltage-gated potassium channel complex
GO:0008088 IMP axon cargo transport
GO:0016021 ISS integral component of membrane
GO:0017124 ISS SH3 domain binding
GO:0019227 IMP neuronal action potential propagation
GO:0030424 IEA axon
GO:0030913 IMP paranodal junction assembly
GO:0031175 IGI neuron projection development
GO:0033270 IDA paranode region of axon
GO:0048812 IMP neuron projection morphogenesis
GO:0050884 IMP neuromuscular process controlling posture
GO:0050885 IMP neuromuscular process controlling balance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074524 CNTNAP1 contactin associated protein 1 protein_coding Danio_rerio
ENSG00000108797 CNTNAP1 contactin associated protein 1 protein_coding Homo_sapiens

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