C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PTGES3L-AARSD1 readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108825 PTGES3L-AARSD1 9606 - 17:42950526-42980528 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360221 PTGES3L-AARSD1-004 42950526-42980003 protein_coding
  ENST00000409103 PTGES3L-AARSD1-005 42950546-42979993 protein_coding
  ENST00000409399 PTGES3L-AARSD1-002 42950530-42980490 protein_coding
  ENST00000421990 PTGES3L-AARSD1-001 42950550-42980528 protein_coding
  ENST00000423601 PTGES3L-AARSD1-006 42954951-42980138 nonsense_mediated_decay
  ENST00000452752 PTGES3L-AARSD1-007 42961264-42979663 protein_coding
  ENST00000454303 PTGES3L-AARSD1-003 42964219-42980086 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartKidneyLungOvaryPlacentaENST00000409103ENST00000421990ENST00000423601ENST00000452752ENST00000454303
Transcript ID Bladder Colon Heart Kidney Lung Ovary Placenta
ENST00000409103 N/A N/A N/A N/A 2.198±0.00 N/A N/A
ENST00000421990 0.357±0.00 N/A N/A N/A N/A N/A N/A
ENST00000423601 N/A N/A N/A 1.966±0.00 N/A N/A 6.287±0.00
ENST00000452752 N/A N/A N/A N/A N/A 1.694±0.00 N/A
ENST00000454303 N/A 3.638±0.00 3.157±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000447 CIL_000447_0001 CGP 17:42900797-42980528
CIL_00063V CIL_00063V_0001 CGP 17:42950526-42980528

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0004813 IEA alanine-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006419 IEA alanyl-tRNA aminoacylation
GO:0008150 ND biological_process
GO:0016876 IEA ligase activity, forming aminoacyl-tRNA and related compounds
GO:0043039 IEA tRNA aminoacylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079462 prostaglandin E synthase 3 (cytosolic)-like protein_coding Danio_rerio
ENSMUSG00000097239 Gm27029 predicted gene, 27029 protein_coding Mus_musculus
ENSMUSG00000097487 Ptges3l prostaglandin E synthase 3 (cytosolic)-like protein_coding Mus_musculus

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