C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hepatic leukemia factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108924 HLF 9606 + 17:55265012-55325065 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000226067 HLF-001 55265012-55325065 protein_coding
  ENST00000430986 HLF-002 55265810-55321414 protein_coding
  ENST00000570962 HLF-004 55267615-55321285 nonsense_mediated_decay
  ENST00000572002 HLF-011 55267816-55321419 protein_coding
  ENST00000572234 HLF-007 55283496-55288930 processed_transcript
  ENST00000573020 HLF-006 55283482-55315424 processed_transcript
  ENST00000573422 HLF-008 55283700-55320857 processed_transcript
  ENST00000573945 HLF-003 55266222-55322989 protein_coding
  ENST00000575307 HLF-010 55318953-55321143 processed_transcript
  ENST00000575345 HLF-005 55267591-55323535 protein_coding
  ENST00000575868 HLF-009 55283720-55315447 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000226067ENST00000430986ENST00000573945ENST00000575307ENST00000575345
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000226067 1.183±0.00 0.282±0.00 1.556±0.00 10.995±2.58 1.784±1.02 1.688±0.77 2.163±0.44 2.827±0.52 5.178±0.00 1.796±0.49 N/A 2.305±1.95 0.039±0.00 2.023±1.00
ENST00000430986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A N/A
ENST00000573945 0.660±0.00 N/A 2.018±0.00 8.362±0.00 N/A N/A 1.681±0.20 6.313±0.00 N/A N/A N/A N/A N/A N/A
ENST00000575307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.401±0.00 N/A
ENST00000575345 N/A N/A N/A 6.548±0.00 1.659±0.00 0.759±0.00 1.720±0.00 11.880±0.00 4.271±0.56 3.347±0.00 N/A 0.817±0.27 0.627±0.49 1.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WY CIL_0004WY_0002 CGP 17:54968727-55325065

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0003690 TAS double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007275 TAS multicellular organismal development
GO:0035914 IEA skeletal muscle cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0048511 IEA rhythmic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061011 hlfb hepatic leukemia factor b protein_coding Danio_rerio
ENSMUSG00000003949 Hlf hepatic leukemia factor protein_coding Mus_musculus

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