C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hepatic leukemia factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000575345 HLF-005 ENSG00000108924 9606 + 17:55267591-55323535 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000575345
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000575345 6.548±0.00 1.659±0.00 0.759±0.00 1.720±0.00 11.880±0.00 4.271±0.56 3.347±0.00 0.817±0.27 0.627±0.49 1.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WY CIL_0004WY_0002 CGP 17:54968727-55325065

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0003690 TAS double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007275 TAS multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding
GO:0048511 IEA rhythmic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004051 Hlf-001 protein_coding Mus_musculus 0 1435
ENSMUST00000107881 Hlf-003 processed_transcript Mus_musculus 0 1279
ENSMUST00000043658 Hlf-002 processed_transcript Mus_musculus 0 1129
ENSMUST00000137957 Hlf-005 processed_transcript Mus_musculus 0 540
ENSMUST00000176001 Hlf-006 protein_coding Mus_musculus 0 520
ENSMUST00000145786 Hlf-004 processed_transcript Mus_musculus 0 237

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