C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109182 CWH43 9606 + 4:48986247-49062081 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000226432 CWH43-001 48986247-49062079 protein_coding
  ENST00000506221 CWH43-007 49003609-49017329 retained_intron
  ENST00000507372 CWH43-008 49028692-49031276 retained_intron
  ENST00000513409 CWH43-002 48986639-49062076 protein_coding
  ENST00000514053 CWH43-006 48986313-49062081 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000226432ENST00000506221ENST00000507372ENST00000513409ENST00000514053
Transcript ID Adipose Bladder Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000226432 N/A 0.984±0.00 N/A 5.537±0.00 3.285±0.00 N/A N/A 1.050±0.05 N/A 0.277±0.00
ENST00000506221 0.114±0.00 N/A N/A N/A N/A N/A 0.440±0.00 N/A N/A 0.217±0.00
ENST00000507372 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513409 N/A N/A 0.058±0.00 1.014±0.64 N/A 0.235±0.00 N/A 0.457±0.20 N/A 0.012±0.00
ENST00000514053 N/A N/A N/A 0.602±0.00 0.880±0.00 N/A 0.327±0.25 0.326±0.00 0.050±0.03 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MU CIL_0001MU_0001 CGP 4:48885019-49062081
CIL_0001MT CIL_0001MT_0001 CGP 4:48986247-51916837

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006506 IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000029154 Cwh43 cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) protein_coding Mus_musculus

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