C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109680 TBC1D19 9606 + 4:26576437-26755351 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264866 TBC1D19-001 26583916-26755351 protein_coding
  ENST00000502873 TBC1D19-002 26584084-26754227 retained_intron
  ENST00000504442 TBC1D19-006 26576696-26666405 processed_transcript
  ENST00000505206 TBC1D19-007 26584089-26683722 protein_coding
  ENST00000511789 TBC1D19-003 26584194-26754947 protein_coding
  ENST00000512840 TBC1D19-004 26576682-26688348 protein_coding
  ENST00000513455 TBC1D19-005 26576437-26620667 protein_coding
  ENST00000513596 TBC1D19-008 26584954-26640155 protein_coding
  ENST00000515568 TBC1D19-009 26584282-26663073 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264866ENST00000502873ENST00000504442ENST00000505206ENST00000511789ENST00000512840ENST00000513596ENST00000515568
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264866 0.356±0.00 N/A N/A 0.935±0.00 0.657±0.00 0.731±0.00 0.901±0.33 0.975±0.00 0.115±0.00 0.760±0.00 0.138±0.00 0.653±0.39 0.994±0.37 1.443±0.39
ENST00000502873 N/A N/A N/A N/A 0.301±0.00 0.398±0.19 N/A 0.151±0.00 0.646±0.00 N/A 0.123±0.00 0.976±0.69 N/A 0.538±0.00
ENST00000504442 N/A N/A 1.673±0.00 N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A
ENST00000505206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.288±0.00 N/A N/A
ENST00000511789 0.743±0.00 0.465±0.00 N/A 1.198±0.12 0.795±0.00 1.160±0.00 0.639±0.00 2.189±0.00 0.118±0.00 0.547±0.00 0.619±0.00 1.357±0.18 0.782±0.48 1.299±0.00
ENST00000512840 N/A 0.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513596 N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A
ENST00000515568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.378±0.00 N/A N/A 0.861±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TQ CIL_0002TQ_0002 CGP 4:26481400-26755351
CIL_0002TT CIL_0002TT_0002 CGP 4:26576437-27025381

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013842 tbc1d19 TBC1 domain family, member 19 protein_coding Danio_rerio
ENSMUSG00000039178 Tbc1d19 TBC1 domain family, member 19 protein_coding Mus_musculus

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