C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apolipoprotein A-V
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110243 APOA5 9606 - 11:116789367-116792420 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000227665 APOA5-001 116789367-116791895 protein_coding
  ENST00000433069 APOA5-002 116790743-116792411 protein_coding
  ENST00000542499 APOA5-201 116789373-116792420 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverOvaryTestisENST00000227665ENST00000433069ENST00000542499
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Ovary Testis
ENST00000227665 0.012±0.00 0.027±0.00 0.016±0.00 0.038±0.00 N/A 151.648±0.00 0.045±0.00 0.146±0.07
ENST00000433069 N/A N/A N/A 0.208±0.00 40.907±0.00 N/A 0.061±0.00 N/A
ENST00000542499 N/A N/A N/A 0.014±0.00 18.927±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EK CIL_0008EK_0001 VISTA 11:116351165-116951910
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005543 IDA phospholipid binding
GO:0005576 IDA:IEA extracellular region
GO:0005615 IDA extracellular space
GO:0006641 IDA triglyceride metabolic process
GO:0006869 IDA:IEA lipid transport
GO:0008047 IDA enzyme activator activity
GO:0008201 IDA heparin binding
GO:0008289 IEA:IDA lipid binding
GO:0009725 IEA response to hormone
GO:0010898 IDA positive regulation of triglyceride catabolic process
GO:0010902 IDA positive regulation of very-low-density lipoprotein particle remodeling
GO:0019433 IMP triglyceride catabolic process
GO:0019899 IDA enzyme binding
GO:0031100 IEA organ regeneration
GO:0031210 IDA phosphatidylcholine binding
GO:0034361 IDA very-low-density lipoprotein particle
GO:0034364 IDA high-density lipoprotein particle
GO:0034370 IEA triglyceride-rich lipoprotein particle remodeling
GO:0035473 IPI lipase binding
GO:0042157 IEA lipoprotein metabolic process
GO:0042246 IEP tissue regeneration
GO:0042627 IDA chylomicron
GO:0042632 IDA cholesterol homeostasis
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045723 IDA positive regulation of fatty acid biosynthetic process
GO:0048260 TAS positive regulation of receptor-mediated endocytosis
GO:0050750 IPI low-density lipoprotein particle receptor binding
GO:0050996 IDA positive regulation of lipid catabolic process
GO:0051006 IDA positive regulation of lipoprotein lipase activity
GO:0055090 IDA acylglycerol homeostasis
GO:0060229 IMP lipase activator activity
GO:0060230 IDA lipoprotein lipase activator activity
GO:0070325 IPI lipoprotein particle receptor binding
GO:0070328 IMP triglyceride homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000032079 Apoa5 apolipoprotein A-V protein_coding Mus_musculus

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