C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein A-V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000227665 APOA5-001 ENSG00000110243 9606 - 11:116789367-116791895 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverOvaryTestisENST00000227665
Transcript ID Adipose Adrenal Brain Breast Liver Ovary Testis
ENST00000227665 0.012±0.00 0.027±0.00 0.016±0.00 0.038±0.00 151.648±0.00 0.045±0.00 0.146±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EK CIL_0008EK_0001 VISTA 11:116351165-116951910
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005543 IDA phospholipid binding
GO:0005576 IDA:IEA extracellular region
GO:0005615 IDA extracellular space
GO:0006641 IDA triglyceride metabolic process
GO:0006869 IDA:IEA lipid transport
GO:0008047 IDA enzyme activator activity
GO:0008201 IDA heparin binding
GO:0008289 IEA:IDA lipid binding
GO:0010898 IDA positive regulation of triglyceride catabolic process
GO:0010902 IDA positive regulation of very-low-density lipoprotein particle remodeling
GO:0019433 IMP triglyceride catabolic process
GO:0019899 IDA enzyme binding
GO:0031210 IDA phosphatidylcholine binding
GO:0034361 IDA very-low-density lipoprotein particle
GO:0034364 IDA high-density lipoprotein particle
GO:0035473 IPI lipase binding
GO:0042157 IEA lipoprotein metabolic process
GO:0042246 IEP tissue regeneration
GO:0042627 IDA chylomicron
GO:0042632 IDA cholesterol homeostasis
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045723 IDA positive regulation of fatty acid biosynthetic process
GO:0048260 TAS positive regulation of receptor-mediated endocytosis
GO:0050750 IPI low-density lipoprotein particle receptor binding
GO:0050996 IDA positive regulation of lipid catabolic process
GO:0051006 IDA positive regulation of lipoprotein lipase activity
GO:0055090 IDA acylglycerol homeostasis
GO:0060229 IMP lipase activator activity
GO:0060230 IDA lipoprotein lipase activator activity
GO:0070325 IPI lipoprotein particle receptor binding
GO:0070328 IMP triglyceride homeostasis

Homologs

No Homologs available.

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