C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110429 FBXO3 9606 - 11:33740939-33774543 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265651 FBXO3-001 33740946-33774516 protein_coding
  ENST00000448981 FBXO3-003 33746743-33774543 protein_coding
  ENST00000526785 FBXO3-008 33740939-33774347 protein_coding
  ENST00000526952 FBXO3-010 33763206-33772003 processed_transcript
  ENST00000527772 FBXO3-013 33745937-33748812 processed_transcript
  ENST00000529137 FBXO3-012 33755953-33774504 nonsense_mediated_decay
  ENST00000530013 FBXO3-009 33740956-33774525 retained_intron
  ENST00000530401 FBXO3-002 33740965-33774518 protein_coding
  ENST00000531080 FBXO3-005 33741442-33753400 protein_coding
  ENST00000532057 FBXO3-006 33741739-33753399 protein_coding
  ENST00000532927 FBXO3-007 33747242-33774520 nonsense_mediated_decay
  ENST00000533103 FBXO3-011 33758503-33774314 processed_transcript
  ENST00000534136 FBXO3-004 33744685-33774504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265651ENST00000448981ENST00000526785ENST00000530013ENST00000530401ENST00000531080ENST00000532057ENST00000532927ENST00000534136
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265651 6.580±0.00 5.081±0.00 2.741±0.00 7.123±0.36 5.772±3.70 6.430±0.00 9.577±6.06 6.393±4.68 3.523±0.00 4.093±0.00 4.184±0.00 5.779±2.92 2.404±0.55 8.995±3.05
ENST00000448981 N/A N/A N/A N/A N/A 3.270±0.00 N/A N/A N/A 6.356±0.00 3.414±0.00 N/A 1.102±0.00 N/A
ENST00000526785 N/A 1.083±0.00 1.007±0.00 1.295±0.00 N/A 0.656±0.00 0.722±0.00 1.670±0.00 2.441±0.00 1.442±0.89 0.969±0.00 N/A N/A N/A
ENST00000530013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.233±0.00 N/A N/A N/A
ENST00000530401 1.418±0.00 1.627±0.00 0.583±0.00 1.327±0.46 1.266±0.18 1.069±0.00 0.506±0.00 1.525±0.00 0.757±0.00 1.240±0.00 N/A 1.598±0.34 0.710±0.19 1.280±0.36
ENST00000531080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.997±0.00 N/A N/A N/A
ENST00000532057 N/A N/A N/A 15.442±0.00 N/A N/A N/A N/A N/A N/A N/A 4.414±0.00 2.232±0.00 7.626±0.13
ENST00000532927 N/A N/A 5.718±0.00 N/A N/A N/A 4.514±0.00 5.142±0.00 9.344±0.00 N/A 7.274±0.00 12.069±0.00 N/A N/A
ENST00000534136 N/A N/A 1.489±0.00 3.121±0.00 N/A 1.732±0.00 N/A 3.357±0.00 2.063±1.15 N/A N/A 1.996±0.02 0.824±0.19 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000929 CIL_000929_0001 VISTA 11:33642739-34246310

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006508 IEA proteolysis
GO:0016567 IEA protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029242 fbxo3 F-box protein 3 protein_coding Danio_rerio
ENSMUSG00000027180 Fbxo3 F-box protein 3 protein_coding Mus_musculus

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