C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530401 FBXO3-002 ENSG00000110429 9606 - 11:33740965-33774518 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000530401
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000530401 1.418±0.00 1.627±0.00 0.583±0.00 1.327±0.46 1.266±0.18 1.069±0.00 0.506±0.00 1.525±0.00 0.757±0.00 1.240±0.00 1.598±0.34 0.710±0.19 1.280±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000929 CIL_000929_0001 VISTA 11:33642739-34246310

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006508 IEA proteolysis
GO:0016567 IEA protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111135 Fbxo3-003 protein_coding Mus_musculus 0 1581
ENSMUST00000102565 Fbxo3-002 protein_coding Mus_musculus 0 1493
ENSMUST00000028603 Fbxo3-001 protein_coding Mus_musculus 0 1480
ENSMUST00000111136 Fbxo3-004 protein_coding Mus_musculus 0 1229
ENSMUST00000143799 Fbxo3-005 processed_transcript Mus_musculus 0 1046
ENSMUST00000113297 Sytl4-002 protein_coding Mus_musculus 0.00006 55
ENSMUST00000033608 Sytl4-001 protein_coding Mus_musculus 0.00007 55
ENSMUST00000113294 Sytl4-003 protein_coding Mus_musculus 0.00005 55
ENSMUST00000174091 Sytl4-004 processed_transcript Mus_musculus 0.00001 55

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