C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 22, member 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110628 SLC22A18 9606 + 11:2899721-2925246 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312221 SLC22A18-001 2902193-2925246 protein_coding
  ENST00000347936 SLC22A18-002 2899721-2925246 protein_coding
  ENST00000380574 SLC22A18-003 2902420-2925246 protein_coding
  ENST00000441077 SLC22A18-004 2916682-2925246 processed_transcript
  ENST00000449603 SLC22A18-008 2916948-2925183 processed_transcript
  ENST00000449793 SLC22A18-005 2902283-2925227 protein_coding
  ENST00000463571 SLC22A18-007 2916236-2925102 retained_intron
  ENST00000467719 SLC22A18-013 2916146-2921238 retained_intron
  ENST00000485423 SLC22A18-012 2903114-2909356 protein_coding
  ENST00000492567 SLC22A18-006 2903376-2916386 processed_transcript
  ENST00000495518 SLC22A18-010 2921968-2925240 retained_intron
  ENST00000498209 SLC22A18-009 2916643-2921826 processed_transcript
  ENST00000498244 SLC22A18-011 2909273-2909818 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312221ENST00000347936ENST00000380574ENST00000441077ENST00000449793ENST00000467719ENST00000485423ENST00000495518ENST00000498209
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312221 4.138±0.00 3.486±0.00 N/A N/A 6.129±0.00 4.330±0.00 3.310±0.00 18.475±0.00 45.829±0.00 4.846±0.00 0.484±0.00 5.554±2.79 8.869±1.84 3.553±0.00
ENST00000347936 N/A N/A 1.208±0.00 0.204±0.00 N/A 2.080±0.00 0.146±0.00 1.321±0.00 N/A N/A N/A 2.491±0.73 9.034±2.07 N/A
ENST00000380574 N/A N/A N/A 1.536±0.00 N/A N/A N/A 5.073±0.00 N/A N/A N/A N/A N/A N/A
ENST00000441077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.903±0.00
ENST00000449793 N/A N/A N/A N/A N/A N/A 0.939±0.00 N/A N/A N/A N/A 11.603±7.94 10.404±0.00 2.705±0.00
ENST00000467719 N/A 0.466±0.00 N/A N/A N/A N/A 0.056±0.00 N/A 0.096±0.00 N/A N/A 1.461±0.00 N/A N/A
ENST00000485423 N/A N/A N/A N/A 0.945±0.00 N/A N/A 0.935±0.00 N/A N/A N/A N/A N/A N/A
ENST00000495518 N/A N/A N/A N/A N/A 3.288±0.00 3.087±0.00 7.267±6.40 N/A N/A N/A 7.349±0.00 N/A N/A
ENST00000498209 N/A N/A N/A N/A 0.382±0.00 N/A N/A N/A N/A 0.851±0.00 N/A 1.084±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000489 CIL_000489_0001 CGP 11:2899721-2929455

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005886 TAS plasma membrane
GO:0006855 IDA drug transmembrane transport
GO:0007588 NAS excretion
GO:0015238 IDA drug transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0015695 NAS organic cation transport
GO:0015893 IDA drug transport
GO:0016020 IDA membrane
GO:0016021 NAS:IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0031625 IPI ubiquitin protein ligase binding
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052271 slc22a18 solute carrier family 22 (organic cation transporter), member 18 protein_coding Danio_rerio
ENSMUSG00000000154 Slc22a18 solute carrier family 22 (organic cation transporter), member 18 protein_coding Mus_musculus

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