C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mago-nashi homolog B (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111196 MAGOHB 9606 - 12:10604190-10613623 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320756 MAGOHB-001 10604190-10613623 protein_coding
  ENST00000398874 MAGOHB-008 10606013-10608040 retained_intron
  ENST00000537852 MAGOHB-003 10606013-10613600 retained_intron
  ENST00000539554 MAGOHB-010 10606013-10613591 protein_coding
  ENST00000540074 MAGOHB-009 10606260-10613591 nonsense_mediated_decay
  ENST00000543929 MAGOHB-007 10609214-10613600 nonsense_mediated_decay
  ENST00000544176 MAGOHB-004 10609604-10613600 retained_intron
  ENST00000544850 MAGOHB-002 10606013-10613594 nonsense_mediated_decay
  ENST00000545236 MAGOHB-005 10606270-10613609 nonsense_mediated_decay
  ENST00000546173 MAGOHB-006 10609277-10613573 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320756ENST00000537852ENST00000539554ENST00000543929ENST00000544176ENST00000544850ENST00000545236ENST00000546173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320756 0.311±0.00 0.914±0.00 N/A 0.792±0.40 0.928±0.48 N/A N/A N/A 0.650±0.00 1.393±0.00 0.082±0.00 0.916±0.14 0.297±0.05 N/A
ENST00000537852 0.265±0.00 N/A N/A N/A 0.635±0.00 N/A N/A N/A 0.338±0.00 0.488±0.00 N/A 0.938±0.00 N/A N/A
ENST00000539554 3.411±0.00 4.981±0.00 N/A 2.492±0.00 5.573±0.00 3.590±0.00 2.207±0.00 3.838±3.33 8.047±0.00 0.861±0.00 N/A 5.548±0.27 3.928±0.88 8.729±0.00
ENST00000543929 N/A N/A N/A 1.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.639±0.00
ENST00000544176 N/A N/A N/A 4.900±0.00 3.763±0.00 N/A 1.031±0.00 0.913±0.00 N/A N/A 0.949±0.00 21.843±18.23 5.954±6.01 5.701±0.00
ENST00000544850 0.713±0.00 N/A 1.030±0.00 1.327±0.34 1.170±0.00 1.361±0.00 0.789±0.24 1.237±0.00 1.548±0.00 1.731±0.32 1.281±0.00 1.829±1.08 0.836±0.22 1.611±0.00
ENST00000545236 N/A 1.970±0.00 N/A N/A 1.568±0.00 N/A 0.334±0.00 0.207±0.00 0.893±0.00 N/A 0.585±0.00 1.354±0.40 0.638±0.00 N/A
ENST00000546173 N/A N/A N/A N/A N/A 1.619±0.00 N/A N/A N/A 1.744±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000K6 CIL_0000K6_0001 CGP 12:10604190-10674318

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038635 magoh mago-nashi homolog, proliferation-associated (Drosophila) protein_coding Danio_rerio
ENSMUSG00000030188 Magohb mago-nashi homolog B (Drosophila) protein_coding Mus_musculus

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