C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mago-nashi homolog B (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320756 MAGOHB-001 ENSG00000111196 9606 - 12:10604190-10613623 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverLungMuscleOvaryPlacentaENST00000320756
Transcript ID Adipose Adrenal Brain Breast Liver Lung Muscle Ovary Placenta
ENST00000320756 0.311±0.00 0.914±0.00 0.792±0.40 0.928±0.48 0.650±0.00 1.393±0.00 0.082±0.00 0.916±0.14 0.297±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000K6 CIL_0000K6_0001 CGP 12:10604190-10674318

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032307 Magohb-001 protein_coding Mus_musculus 0 669
ENSMUST00000173837 Magohb-005 protein_coding Mus_musculus 0 494
ENSMUST00000030348 Magoh-001 protein_coding Mus_musculus 0 464
ENSMUST00000174781 Magohb-006 protein_coding Mus_musculus 0 448
ENSMUST00000172883 Magohb-004 nonsense_mediated_decay Mus_musculus 0 433
ENSMUST00000173198 Magohb-003 nonsense_mediated_decay Mus_musculus 0 394
ENSMUST00000141376 Magoh-002 processed_transcript Mus_musculus 0 335
ENSMUST00000174488 Magohb-007 retained_intron Mus_musculus 0 292

Loading