C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GDP dissociation inhibitor (GDI) beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111348 ARHGDIB 9606 - 12:14942017-14961728 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000228945 ARHGDIB-001 14942017-14961669 protein_coding
  ENST00000535676 ARHGDIB-007 14947689-14961591 retained_intron
  ENST00000536592 ARHGDIB-008 14942045-14950695 protein_coding
  ENST00000539131 ARHGDIB-009 14942370-14948896 processed_transcript
  ENST00000541380 ARHGDIB-004 14947877-14961266 protein_coding
  ENST00000541546 ARHGDIB-002 14942508-14961605 protein_coding
  ENST00000541644 ARHGDIB-006 14942330-14951106 protein_coding
  ENST00000542276 ARHGDIB-003 14949802-14961728 protein_coding
  ENST00000545895 ARHGDIB-005 14942652-14951151 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000228945ENST00000536592ENST00000541644ENST00000542276
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000228945 39.443±0.00 124.259±0.00 7.057±0.00 6.783±1.15 24.449±9.48 12.049±3.30 9.066±4.63 16.644±4.68 12.770±2.87 37.847±8.61 5.159±2.51 42.762±30.51 115.421±21.30 14.200±8.50
ENST00000536592 42.329±0.00 146.508±0.00 N/A 5.180±0.00 31.712±0.00 19.349±0.00 21.765±0.00 33.796±0.00 18.581±0.00 89.600±0.00 6.261±0.00 22.822±0.00 60.516±24.98 22.985±0.00
ENST00000541644 N/A N/A N/A 3.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542276 N/A N/A N/A N/A 25.640±0.00 10.087±0.00 4.607±0.00 18.071±0.00 N/A 44.430±0.00 11.247±0.00 29.702±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000372 CIL_000372_0001 CGP 12:14914035-14961728
CIL_000373 CIL_000373_0001 CGP 12:14942017-14981865

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005094 IEA Rho GDP-dissociation inhibitor activity
GO:0005096 IEA GTPase activator activity
GO:0005737 IEA:TAS cytoplasm
GO:0005829 TAS cytosol
GO:0005856 TAS cytoskeleton
GO:0006928 TAS cellular component movement
GO:0006955 TAS immune response
GO:0007162 TAS negative regulation of cell adhesion
GO:0007264 TAS small GTPase mediated signal transduction
GO:0007266 TAS Rho protein signal transduction
GO:0007275 TAS multicellular organismal development
GO:0016023 TAS cytoplasmic membrane-bounded vesicle
GO:0030036 TAS actin cytoskeleton organization
GO:0043547 IEA positive regulation of GTPase activity
GO:0050790 IEA:TAS regulation of catalytic activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030220 Arhgdib Rho, GDP dissociation inhibitor (GDI) beta protein_coding Mus_musculus

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