C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000373_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111348-ENSG00000139053 CGP 9606 12:14942017-14981865
GeneTranscriptPositionBiotype
ENSG00000111348 (ARHGDIB)
Rho GDP dissociation inhibitor (GDI) beta 		ENST00000228945 (ARHGDIB-001) 14942017-14961669 protein_coding
ENST00000535676 (ARHGDIB-007) 14947689-14961591 retained_intron
ENST00000536592 (ARHGDIB-008) 14942045-14950695 protein_coding
ENST00000539131 (ARHGDIB-009) 14942370-14948896 processed_transcript
ENST00000541380 (ARHGDIB-004) 14947877-14961266 protein_coding
ENST00000541546 (ARHGDIB-002) 14942508-14961605 protein_coding
ENST00000541644 (ARHGDIB-006) 14942330-14951106 protein_coding
ENST00000542276 (ARHGDIB-003) 14949802-14961728 protein_coding
ENST00000545895 (ARHGDIB-005) 14942652-14951151 protein_coding
ENSG00000139053 (PDE6H)
phosphodiesterase 6H, cGMP-specific, cone, gamma 		ENST00000266395 (PDE6H-001) 14973022-14981865 protein_coding
CIL_000373_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030220-ENSMUSG00000064330 CGP 10090 6:136923523-136968865
GeneTranscriptPositionBiotype
ENSMUSG00000030220 (Arhgdib)
Rho, GDP dissociation inhibitor (GDI) beta 		ENSMUST00000032344 (Arhgdib-001) 136923523-136941756 protein_coding
ENSMUST00000111891 (Arhgdib-003) 136924001-136941899 protein_coding
ENSMUST00000111892 (Arhgdib-002) 136923656-136941503 protein_coding
ENSMUST00000154440 (Arhgdib-004) 136933611-136939591 protein_coding
ENSMUSG00000064330 (Pde6h)
phosphodiesterase 6H, cGMP-specific, cone, gamma 		ENSMUST00000057650 (Pde6h-002) 136954533-136963483 retained_intron
ENSMUST00000137768 (Pde6h-001) 136954523-136968865 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000373_0001ENSG00000111348ENST00000228945ENST00000535676ENST00000536592ENST00000539131ENST00000541380ENST00000541546ENST00000541644ENST00000542276ENST00000545895ENSG00000139053ENST00000266395CIL_000373_0002ENSMUSG00000030220ENSMUST00000032344ENSMUST00000111891ENSMUST00000111892ENSMUST00000154440ENSMUSG00000064330ENSMUST00000057650ENSMUST00000137768
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000373_0001ENSG00000111348ENST00000228945ENST00000536592ENST00000541644ENST00000542276ENSG00000139053ENST00000266395CIL_000373_0002ENSMUSG00000030220ENSMUST00000032344ENSMUST00000111891ENSMUST00000111892ENSMUSG00000064330ENSMUST00000057650ENSMUST00000137768
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111348 ENST00000228945 39.443±0.00 124.259±0.00 7.057±0.00 6.783±1.15 24.449±9.48 12.049±3.30 9.066±4.63 16.644±4.68 12.770±2.87 37.847±8.61 5.159±2.51 42.762±30.51 115.421±21.30 14.200±8.50
ENST00000535676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536592 42.329±0.00 146.508±0.00 N/A 5.180±0.00 31.712±0.00 19.349±0.00 21.765±0.00 33.796±0.00 18.581±0.00 89.600±0.00 6.261±0.00 22.822±0.00 60.516±24.98 22.985±0.00
ENST00000539131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541644 N/A N/A N/A 3.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542276 N/A N/A N/A N/A 25.640±0.00 10.087±0.00 4.607±0.00 18.071±0.00 N/A 44.430±0.00 11.247±0.00 29.702±0.00 N/A N/A
ENST00000545895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139053 ENST00000266395 N/A N/A N/A 0.505±0.00 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A 0.559±0.42 0.046±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030220 ENSMUST00000032344 4.287±0.25 1.770±0.00 N/A 2.429±0.43 21.385±0.59 2.345±0.64 3.045±0.72 6.552±3.28 27.732±23.78 7.276±0.69 2.339±2.87 3.597±2.05 41.450±36.45 0.679±0.14
ENSMUST00000111891 N/A 3.779±1.23 N/A 1.888±0.29 N/A 4.108±0.88 N/A N/A 2.618±0.35 N/A 0.686±0.01 5.760±0.87 8.723±3.87 N/A
ENSMUST00000111892 22.222±3.33 7.171±1.92 27.713±6.57 1.659±1.32 101.663±17.81 6.085±2.01 13.848±0.86 20.466±2.84 23.524±20.07 25.990±8.30 2.516±1.13 7.855±3.63 60.118±65.48 1.975±0.84
ENSMUST00000154440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064330 ENSMUST00000057650 0.005±0.00 N/A 0.038±0.00 0.007±0.00 0.021±0.01 0.043±0.02 0.011±0.00 0.035±0.01 0.030±0.02 0.018±0.01 0.015±0.00 0.063±0.02 0.015±0.01 0.082±0.05
ENSMUST00000137768 0.010±0.00 N/A 0.033±0.00 0.004±0.00 0.010±0.00 0.046±0.04 0.014±0.00 0.034±0.01 0.013±0.02 0.020±0.01 N/A 0.054±0.02 0.013±0.01 0.049±0.04

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