C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NOP2 nucleolar protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111641 NOP2 9606 - 12:6556863-6568691 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322166 NOP2-007 6556871-6568324 protein_coding
  ENST00000382421 NOP2-001 6556871-6568278 protein_coding
  ENST00000399466 NOP2-002 6556871-6568286 protein_coding
  ENST00000400580 NOP2-014 6563626-6564305 retained_intron
  ENST00000536124 NOP2-018 6563891-6568293 protein_coding
  ENST00000536506 NOP2-017 6560204-6563136 retained_intron
  ENST00000537442 NOP2-003 6556863-6567962 protein_coding
  ENST00000537708 NOP2-011 6560241-6560981 retained_intron
  ENST00000538420 NOP2-020 6563908-6568275 nonsense_mediated_decay
  ENST00000538697 NOP2-009 6566576-6568296 retained_intron
  ENST00000540228 NOP2-016 6566262-6568297 protein_coding
  ENST00000541778 NOP2-005 6556871-6568691 protein_coding
  ENST00000542015 NOP2-010 6557221-6568281 processed_transcript
  ENST00000542867 NOP2-019 6563440-6568299 protein_coding
  ENST00000542919 NOP2-013 6560936-6563754 retained_intron
  ENST00000542944 NOP2-021 6561674-6566457 protein_coding
  ENST00000544630 NOP2-012 6557554-6560793 retained_intron
  ENST00000545200 NOP2-004 6556871-6568282 protein_coding
  ENST00000545492 NOP2-022 6566098-6568314 protein_coding
  ENST00000545915 NOP2-015 6566260-6568325 protein_coding
  ENST00000546053 NOP2-008 6567500-6568291 retained_intron
  ENST00000616948 NOP2-201 6556863-6567918 protein_coding
  ENST00000617555 NOP2-202 6558028-6568332 protein_coding
  ENST00000620535 NOP2-203 6556870-6568332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322166ENST00000399466ENST00000537442ENST00000541778ENST00000542015ENST00000542867ENST00000542944ENST00000544630ENST00000545200ENST00000545492ENST00000546053ENST00000616948ENST00000617555ENST00000620535
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322166 1.654±0.00 N/A N/A N/A 1.553±0.39 N/A N/A N/A 0.609±0.00 1.288±0.00 N/A 10.489±0.00 N/A 4.650±0.00
ENST00000399466 N/A 4.529±0.00 N/A 0.641±0.00 N/A 4.028±0.00 1.209±0.00 1.942±0.00 3.383±0.00 N/A 10.988±0.00 6.340±0.00 3.566±0.00 N/A
ENST00000537442 N/A N/A N/A N/A N/A N/A 0.644±0.00 N/A 0.496±0.00 1.211±0.00 N/A N/A N/A N/A
ENST00000541778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.977±0.16
ENST00000542015 N/A N/A N/A N/A N/A N/A 1.884±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000542867 N/A N/A N/A N/A 1.707±0.00 2.382±0.00 N/A N/A 1.087±0.00 N/A N/A 5.569±0.00 N/A N/A
ENST00000542944 N/A N/A 0.570±0.00 1.757±0.00 N/A N/A 0.933±0.00 N/A 0.703±0.00 N/A 5.869±0.00 24.427±21.67 7.289±0.00 9.201±0.00
ENST00000544630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.764±0.00 N/A N/A N/A
ENST00000545200 N/A N/A N/A 0.535±0.00 N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A
ENST00000545492 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.898±0.00 N/A N/A N/A N/A
ENST00000546053 N/A N/A N/A N/A N/A N/A 1.394±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000616948 1.617±0.00 N/A 0.126±0.00 1.420±0.14 N/A 1.122±0.00 N/A 1.500±0.32 2.655±0.00 2.050±0.00 N/A 4.201±1.71 7.351±0.00 2.641±0.00
ENST00000617555 N/A N/A 0.583±0.00 N/A N/A N/A 0.189±0.00 N/A N/A 1.343±0.00 N/A N/A N/A N/A
ENST00000620535 2.900±0.00 8.657±0.00 N/A 1.167±0.00 4.706±0.00 3.869±0.00 1.007±0.84 5.911±0.00 5.205±0.00 1.226±0.78 15.665±0.00 10.387±6.90 3.668±0.60 3.692±0.83

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0006364 IEA rRNA processing
GO:0008168 IEA methyltransferase activity
GO:0008284 TAS positive regulation of cell proliferation
GO:0008757 IEA S-adenosylmethionine-dependent methyltransferase activity
GO:0032259 IEA methylation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043304 nop2 NOP2 nucleolar protein homolog (yeast) protein_coding Danio_rerio
ENSMUSG00000038279 Nop2 NOP2 nucleolar protein protein_coding Mus_musculus

Loading