C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP2 nucleolar protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620535 NOP2-203 ENSG00000111641 9606 - 12:6556870-6568332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000620535
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000620535 2.900±0.00 8.657±0.00 1.167±0.00 4.706±0.00 3.869±0.00 1.007±0.84 5.911±0.00 5.205±0.00 1.226±0.78 15.665±0.00 10.387±6.90 3.668±0.60 3.692±0.83

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0006364 IEA rRNA processing
GO:0008168 IEA methyltransferase activity
GO:0008284 TAS positive regulation of cell proliferation
GO:0008757 IEA S-adenosylmethionine-dependent methyltransferase activity
GO:0032259 IEA methylation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044200 Nop2-201 protein_coding Mus_musculus 0 1504
ENSMUST00000162168 Zkscan5-004 nonsense_mediated_decay Mus_musculus 0.0002 53

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