C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: minichromosome maintenance complex component 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111877 MCM9 9606 - 6:118813442-118935162 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316068 MCM9-001 118910597-118935114 protein_coding
  ENST00000316316 MCM9-002 118813442-118935162 protein_coding
  ENST00000368478 MCM9-007 118829028-118894272 processed_transcript
  ENST00000425154 MCM9-004 118923963-118935024 protein_coding
  ENST00000436788 MCM9-003 118910597-118924052 retained_intron
  ENST00000458674 MCM9-008 118816181-118829253 protein_coding
  ENST00000505446 MCM9-005 118931490-118934476 protein_coding
  ENST00000505485 MCM9-006 118828014-118894356 processed_transcript
  ENST00000619706 MCM9-201 118813449-118931738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316316ENST00000436788ENST00000619706
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316316 1.366±0.00 N/A 1.439±0.00 1.428±0.00 1.638±0.00 N/A 1.149±0.00 N/A 2.004±0.00 0.520±0.00 N/A 3.267±0.00 N/A
ENST00000436788 N/A 0.844±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619706 N/A 2.344±0.00 0.953±0.00 2.839±0.00 0.721±0.00 0.519±0.00 1.581±0.12 0.805±0.18 1.786±0.00 0.444±0.00 1.843±0.47 1.528±0.03 2.163±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000991 CIL_000991_0001 VISTA 6:118257793-118860023
CIL_0005OT CIL_0005OT_0001 CGP 6:118813442-118935162

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IDA double-strand break repair via homologous recombination
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0007276 IEA gamete generation
GO:0007292 ISS female gamete generation
GO:0015979 IEA photosynthesis
GO:0015995 IEA chlorophyll biosynthetic process
GO:0016851 IEA magnesium chelatase activity
GO:0016887 IEA ATPase activity
GO:0097362 IDA MCM8-MCM9 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013528 mcm9 minichromosome maintenance complex component 9 protein_coding Danio_rerio
ENSMUSG00000058298 Mcm9 minichromosome maintenance complex component 9 protein_coding Mus_musculus

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