C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000991_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2189 VISTA 9606 6:118257793-118860023
GeneTranscriptPositionBiotype
ENSG00000169075 (BRD7P3)
bromodomain containing 7 pseudogene 3 		ENST00000469424 (BRD7P3-001) 118501430-118502906 processed_pseudogene
ENSG00000196376 (SLC35F1)
solute carrier family 35, member F1 		ENST00000360388 (SLC35F1-001) 117907526-118317676 protein_coding
ENST00000621341 (SLC35F1-201) 118154442-118317676 protein_coding
ENSG00000198523 (PLN)
phospholamban 		ENST00000357525 (PLN-001) 118548298-118560730 protein_coding
ENSG00000216809 (RP11-57K17.1)
 ENST00000407450 (RP11-57K17.1-001) 118452469-118454992 processed_pseudogene
ENSG00000217330 (SSXP10)
SSX family pseudogene 10 		ENST00000402595 (SSXP10-001) 118589070-118589634 processed_pseudogene
ENSG00000225549 (RP11-210H10__A.1)
 ENST00000404721 (RP11-210H10__A.1-001) 118782848-118783131 transcribed_processed_pseudogene
ENST00000429807 (RP11-210H10__A.1-002) 118757518-118783420 processed_transcript
CIL_000991_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2189 VISTA 10090 10:53043568-53644849
GeneTranscriptPositionBiotype
ENSMUSG00000019856 (Fam184a)
family with sequence similarity 184, member A 		ENSMUST00000020003 (Fam184a-001) 53633145-53750880 protein_coding
ENSMUST00000163761 (Fam184a-006) 53633370-53699343 protein_coding
ENSMUST00000164393 (Fam184a-007) 53633634-53638269 protein_coding
ENSMUST00000165986 (Fam184a-004) 53633369-53655033 nonsense_mediated_decay
ENSMUST00000168949 (Fam184a-003) 53638180-53679054 processed_transcript
ENSMUST00000169866 (Fam184a-008) 53633630-53647080 protein_coding
ENSMUST00000170839 (Fam184a-002) 53696997-53750909 retained_intron
ENSMUST00000171807 (Fam184a-005) 53633366-53694823 protein_coding
ENSMUSG00000019857 (Asf1a)
anti-silencing function 1A histone chaperone 		ENSMUST00000020004 (Asf1a-201) 53596961-53609213 protein_coding
ENSMUSG00000038583 (Pln)
phospholamban 		ENSMUST00000046221 (Pln-201) 53337686-53345999 protein_coding
ENSMUST00000163319 (Pln-202) 53337686-53345999 protein_coding
ENSMUSG00000038594 (Cep85l)
centrosomal protein 85-like 		ENSMUST00000095691 (Cep85l-201) 53278081-53379851 protein_coding
ENSMUSG00000038602 (Slc35f1)
solute carrier family 35, member F1 		ENSMUST00000105473 (Slc35f1-001) 52690533-53111622 protein_coding
ENSMUSG00000056219 (Gm5423)
predicted gene 5423 		ENSMUST00000168554 (Gm5423-201) 53474964-53475467 protein_coding
ENSMUSG00000058298 (Mcm9)
minichromosome maintenance complex component 9 		ENSMUST00000075540 (Mcm9-201) 53536329-53630439 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000991_0001ENSG00000169075ENST00000469424ENSG00000196376ENST00000360388ENST00000621341ENSG00000198523ENST00000357525ENSG00000216809ENST00000407450ENSG00000217330ENST00000402595ENSG00000225549ENST00000404721ENST00000429807CIL_000991_0002ENSMUSG00000019856ENSMUST00000020003ENSMUST00000163761ENSMUST00000164393ENSMUST00000165986ENSMUST00000168949ENSMUST00000169866ENSMUST00000170839ENSMUST00000171807ENSMUSG00000019857ENSMUST00000020004ENSMUSG00000038583ENSMUST00000046221ENSMUST00000163319ENSMUSG00000038594ENSMUST00000095691ENSMUSG00000038602ENSMUST00000105473ENSMUSG00000056219ENSMUST00000168554ENSMUSG00000058298ENSMUST00000075540
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000991_0001ENSG00000169075ENST00000469424ENSG00000196376ENST00000360388ENST00000621341ENSG00000198523ENST00000357525ENSG00000216809ENST00000407450ENSG00000217330ENST00000402595ENSG00000225549ENST00000404721ENST00000429807CIL_000991_0002ENSMUSG00000019856ENSMUST00000020003ENSMUST00000163761ENSMUST00000165986ENSMUST00000168949ENSMUST00000169866ENSMUST00000170839ENSMUST00000171807ENSMUSG00000019857ENSMUST00000020004ENSMUSG00000038583ENSMUST00000046221ENSMUST00000163319ENSMUSG00000038594ENSMUST00000095691ENSMUSG00000038602ENSMUST00000105473ENSMUSG00000056219ENSMUST00000168554ENSMUSG00000058298ENSMUST00000075540
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169075 ENST00000469424 0.098±0.00 0.032±0.00 0.021±0.00 0.060±0.02 0.272±0.00 0.095±0.00 0.068±0.03 0.022±0.00 0.310±0.00 0.242±0.13 0.007±0.00 0.028±0.01 N/A 0.249±0.07
ENSG00000196376 ENST00000360388 0.670±0.00 N/A N/A 5.768±3.60 N/A 0.681±0.59 N/A N/A N/A 0.052±0.00 N/A 0.302±0.00 N/A 0.439±0.00
ENST00000621341 0.240±0.00 0.598±0.00 0.186±0.00 6.784±2.30 0.680±0.39 1.162±0.83 0.910±0.00 0.175±0.15 0.161±0.13 0.087±0.00 0.146±0.11 0.127±0.03 0.045±0.02 0.404±0.28
ENSG00000198523 ENST00000357525 3.372±0.00 15.801±0.00 2.574±0.00 0.973±0.00 8.155±3.91 35.497±14.77 494.520±36.55 2.750±2.54 17.339±17.06 10.127±0.20 57.310±4.37 2.501±2.02 0.521±0.64 7.437±6.64
ENSG00000216809 ENST00000407450 0.014±0.00 0.055±0.00 N/A 0.180±0.12 0.159±0.15 0.123±0.09 0.075±0.00 N/A 0.261±0.00 0.279±0.00 0.387±0.00 0.139±0.14 0.022±0.00 0.155±0.11
ENSG00000217330 ENST00000402595 N/A 0.140±0.00 N/A 0.024±0.00 N/A 0.193±0.00 0.076±0.03 N/A 0.823±0.00 0.160±0.00 0.563±0.00 0.192±0.16 N/A 0.144±0.00
ENSG00000225549 ENST00000404721 N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A 0.329±0.24 N/A N/A
ENST00000429807 N/A N/A N/A 0.050±0.00 0.064±0.00 N/A N/A N/A 0.025±0.00 0.105±0.00 0.373±0.25 0.052±0.00 0.066±0.00 0.035±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019856 ENSMUST00000020003 N/A N/A 0.219±0.00 1.445±0.50 N/A N/A N/A N/A N/A N/A 0.034±0.00 0.444±0.00 0.330±0.00 2.803±0.00
ENSMUST00000163761 0.315±0.00 N/A 0.212±0.00 1.806±0.00 0.159±0.00 N/A N/A N/A 0.019±0.00 N/A 0.042±0.01 0.706±0.18 0.231±0.12 11.580±0.00
ENSMUST00000164393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165986 0.206±0.02 N/A N/A N/A 0.096±0.03 0.101±0.01 N/A 0.762±0.10 0.051±0.01 0.773±0.12 N/A 0.527±0.00 N/A 14.012±1.96
ENSMUST00000168949 N/A N/A N/A N/A 0.159±0.11 N/A N/A N/A 0.054±0.02 N/A 0.077±0.04 N/A 0.370±0.29 N/A
ENSMUST00000169866 N/A N/A N/A N/A N/A 0.472±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170839 0.163±0.00 N/A N/A N/A 0.250±0.08 0.076±0.00 N/A N/A 0.084±0.02 N/A 0.058±0.00 N/A N/A 10.142±0.00
ENSMUST00000171807 N/A 0.172±0.06 N/A 8.233±0.00 0.108±0.02 0.087±0.02 0.158±0.03 1.049±0.29 0.095±0.00 0.696±0.00 0.014±0.00 0.873±0.44 0.893±0.15 10.877±0.00
ENSMUSG00000019857 ENSMUST00000020004 3.183±0.71 1.538±0.35 3.339±0.44 6.375±4.00 1.998±0.31 2.016±0.18 2.302±0.46 2.498±0.34 6.225±4.79 2.815±0.82 2.835±0.70 3.287±1.06 7.401±1.91 2.819±0.71
ENSMUSG00000038583 ENSMUST00000046221 2.559±1.72 0.274±0.07 2.569±0.42 0.090±0.04 0.469±0.18 6.712±1.09 1377.355±313.87 1.543±0.57 0.076±0.06 6.869±0.91 0.582±0.28 2.301±1.08 0.148±0.23 12.802±6.31
ENSMUST00000163319 N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A 0.730±0.00 0.146±0.03 0.767±0.00 N/A N/A
ENSMUSG00000038594 ENSMUST00000095691 1.704±0.53 8.990±0.82 N/A N/A 2.219±1.19 1.343±0.38 0.998±0.65 1.103±0.40 2.150±1.18 1.288±0.21 N/A 4.113±1.88 1.906±0.54 78.070±55.16
ENSMUSG00000038602 ENSMUST00000105473 0.210±0.01 0.444±0.19 0.934±0.03 14.474±5.31 0.259±0.08 0.641±0.20 0.369±0.06 1.061±0.22 0.037±0.03 0.132±0.08 0.182±0.05 0.683±0.25 0.034±0.01 0.053±0.04
ENSMUSG00000056219 ENSMUST00000168554 N/A N/A 0.136±0.00 1.487±0.00 0.247±0.00 N/A N/A 0.084±0.00 0.123±0.03 0.082±0.00 N/A N/A N/A 0.160±0.08
ENSMUSG00000058298 ENSMUST00000075540 1.479±0.87 1.138±0.42 1.812±0.18 0.708±0.46 0.957±0.37 2.448±0.78 0.094±0.00 0.796±0.30 0.979±0.70 0.992±0.29 0.133±0.05 2.355±1.07 1.389±0.29 1.232±0.27

Loading