C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium channel tetramerization domain containing 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112078 KCTD20 9606 + 6:36442767-36491143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265344 KCTD20-005 36443036-36487406 nonsense_mediated_decay
  ENST00000373731 KCTD20-001 36442767-36491143 protein_coding
  ENST00000443316 KCTD20-007 36443012-36443723 processed_transcript
  ENST00000449081 KCTD20-004 36443028-36490377 protein_coding
  ENST00000460983 KCTD20-009 36443038-36474889 protein_coding
  ENST00000474988 KCTD20-002 36443017-36488096 processed_transcript
  ENST00000481911 KCTD20-003 36443021-36487667 nonsense_mediated_decay
  ENST00000483557 KCTD20-008 36443007-36474957 protein_coding
  ENST00000498267 KCTD20-006 36443017-36474921 protein_coding
  ENST00000536244 KCTD20-201 36442767-36491143 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265344ENST00000373731ENST00000449081ENST00000536244
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265344 N/A 1.508±0.00 N/A N/A 3.160±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373731 10.209±0.00 N/A 4.477±0.89 6.248±2.12 4.324±1.50 1.982±0.91 4.030±0.47 2.292±0.90 3.829±0.00 1.739±0.64 7.323±2.52 6.092±1.40 6.328±2.18
ENST00000449081 N/A 0.462±0.00 1.459±0.38 N/A N/A N/A N/A N/A 2.836±0.00 N/A 4.617±0.00 N/A N/A
ENST00000536244 N/A N/A 1.967±1.22 9.210±0.00 N/A N/A N/A N/A 4.109±0.00 N/A 3.503±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YB CIL_0002YB_0001 CGP 6:36390551-36491143
CIL_0002YA CIL_0002YA_0001 CGP 6:36442767-36547470

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0042327 ISS positive regulation of phosphorylation
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059381 KCTD20 potassium channel tetramerization domain containing 20 protein_coding Danio_rerio
ENSMUSG00000005936 Kctd20 potassium channel tetramerisation domain containing 20 protein_coding Mus_musculus

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