C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002YA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112078-ENSG00000112079 CGP 9606 6:36442767-36547470
GeneTranscriptPositionBiotype
ENSG00000112078 (KCTD20)
potassium channel tetramerization domain containing 20 		ENST00000265344 (KCTD20-005) 36443036-36487406 nonsense_mediated_decay
ENST00000373731 (KCTD20-001) 36442767-36491143 protein_coding
ENST00000443316 (KCTD20-007) 36443012-36443723 processed_transcript
ENST00000449081 (KCTD20-004) 36443028-36490377 protein_coding
ENST00000460983 (KCTD20-009) 36443038-36474889 protein_coding
ENST00000474988 (KCTD20-002) 36443017-36488096 processed_transcript
ENST00000481911 (KCTD20-003) 36443021-36487667 nonsense_mediated_decay
ENST00000483557 (KCTD20-008) 36443007-36474957 protein_coding
ENST00000498267 (KCTD20-006) 36443017-36474921 protein_coding
ENST00000536244 (KCTD20-201) 36442767-36491143 protein_coding
ENSG00000112079 (STK38)
serine/threonine kinase 38 		ENST00000229812 (STK38-001) 36493892-36547470 protein_coding
ENSG00000239964 (RN7SL748P)
RNA, 7SL, cytoplasmic 748, pseudogene 		ENST00000483066 (RN7SL748P-201) 36522191-36522501 misc_RNA
ENSG00000240733 (RN7SL502P)
RNA, 7SL, cytoplasmic 502, pseudogene 		ENST00000481857 (RN7SL502P-201) 36450912-36451201 misc_RNA
ENSG00000264878 (Z85986.1)
 ENST00000583113 (Z85986.1-201) 36510517-36510598 miRNA
CIL_0002YA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005936-ENSMUSG00000024006 CGP 10090 17:28951950-29007945
GeneTranscriptPositionBiotype
ENSMUSG00000005936 (Kctd20)
potassium channel tetramerisation domain containing 20 		ENSMUST00000057174 (Kctd20-001) 28952466-28967929 protein_coding
ENSMUST00000117672 (Kctd20-002) 28953216-28967935 protein_coding
ENSMUST00000118762 (Kctd20-003) 28952436-28969549 protein_coding
ENSMUST00000122163 (Kctd20-004) 28952599-28967929 protein_coding
ENSMUST00000150858 (Kctd20-006) 28952503-28967092 processed_transcript
ENSMUST00000153462 (Kctd20-005) 28951950-28964121 protein_coding
ENSMUST00000153831 (Kctd20-007) 28952688-28965078 protein_coding
ENSMUST00000168507 (Kctd20-201) 28953216-28967937 protein_coding
ENSMUSG00000024006 (Stk38)
serine/threonine kinase 38 		ENSMUST00000009138 (Stk38-001) 28970885-29007937 protein_coding
ENSMUST00000119274 (Stk38-002) 28972237-29007937 protein_coding
ENSMUST00000125070 (Stk38-010) 28974343-28980010 processed_transcript
ENSMUST00000126619 (Stk38-012) 28977397-28979745 processed_transcript
ENSMUST00000126671 (Stk38-014) 28973092-28974719 processed_transcript
ENSMUST00000126893 (Stk38-003) 28979766-29007945 processed_transcript
ENSMUST00000129094 (Stk38-007) 28987933-28991418 processed_transcript
ENSMUST00000140355 (Stk38-013) 28974343-28979475 processed_transcript
ENSMUST00000141431 (Stk38-009) 28972939-28982186 retained_intron
ENSMUST00000142366 (Stk38-005) 28991405-29007735 processed_transcript
ENSMUST00000142923 (Stk38-011) 28974571-28979760 processed_transcript
ENSMUST00000144299 (Stk38-008) 28974282-28982475 retained_intron
ENSMUST00000144516 (Stk38-006) 28983550-29000055 retained_intron
ENSMUST00000145298 (Stk38-004) 28997564-29007896 processed_transcript
ENSMUST00000156732 (Stk38-015) 28971017-28973077 processed_transcript
ENSMUSG00000084632 (Gm23887)
predicted gene, 23887 		ENSMUST00000122683 (Gm23887-201) 28989977-28990148 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YA_0001ENSG00000112078ENST00000265344ENST00000373731ENST00000443316ENST00000449081ENST00000460983ENST00000474988ENST00000481911ENST00000483557ENST00000498267ENST00000536244ENSG00000112079ENST00000229812ENSG00000239964ENST00000483066ENSG00000240733ENST00000481857ENSG00000264878ENST00000583113CIL_0002YA_0002ENSMUSG00000005936ENSMUST00000057174ENSMUST00000117672ENSMUST00000118762ENSMUST00000122163ENSMUST00000150858ENSMUST00000153462ENSMUST00000153831ENSMUST00000168507ENSMUSG00000024006ENSMUST00000009138ENSMUST00000119274ENSMUST00000125070ENSMUST00000126619ENSMUST00000126671ENSMUST00000126893ENSMUST00000129094ENSMUST00000140355ENSMUST00000141431ENSMUST00000142366ENSMUST00000142923ENSMUST00000144299ENSMUST00000144516ENSMUST00000145298ENSMUST00000156732ENSMUSG00000084632ENSMUST00000122683
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YA_0001ENSG00000112078ENST00000265344ENST00000373731ENST00000449081ENST00000536244ENSG00000112079ENST00000229812ENSG00000239964ENST00000483066ENSG00000240733ENST00000481857ENSG00000264878ENST00000583113CIL_0002YA_0002ENSMUSG00000005936ENSMUST00000057174ENSMUST00000117672ENSMUST00000118762ENSMUST00000122163ENSMUST00000150858ENSMUST00000153462ENSMUST00000153831ENSMUST00000168507ENSMUSG00000024006ENSMUST00000009138ENSMUST00000119274ENSMUST00000126893ENSMUST00000156732ENSMUSG00000084632ENSMUST00000122683
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112078 ENST00000265344 N/A N/A 1.508±0.00 N/A N/A 3.160±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373731 10.209±0.00 N/A N/A 4.477±0.89 6.248±2.12 4.324±1.50 1.982±0.91 4.030±0.47 2.292±0.90 3.829±0.00 1.739±0.64 7.323±2.52 6.092±1.40 6.328±2.18
ENST00000443316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449081 N/A N/A 0.462±0.00 1.459±0.38 N/A N/A N/A N/A N/A 2.836±0.00 N/A 4.617±0.00 N/A N/A
ENST00000460983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536244 N/A N/A N/A 1.967±1.22 9.210±0.00 N/A N/A N/A N/A 4.109±0.00 N/A 3.503±0.00 N/A N/A
ENSG00000112079 ENST00000229812 10.458±0.00 6.407±0.00 N/A 0.343±0.17 10.870±0.00 5.208±0.81 4.067±2.96 4.809±2.60 4.935±0.63 5.341±0.00 2.348±1.21 13.983±8.48 12.413±3.63 8.668±1.59
ENSG00000239964 ENST00000483066 N/A 0.056±0.00 N/A 0.062±0.00 N/A 0.868±0.00 0.142±0.03 N/A 0.053±0.00 N/A 0.053±0.00 N/A N/A N/A
ENSG00000240733 ENST00000481857 0.301±0.00 0.129±0.00 N/A 0.493±0.00 0.404±0.00 0.723±0.00 N/A 0.198±0.00 N/A 0.064±0.00 N/A 1.143±0.00 N/A 0.294±0.00
ENSG00000264878 ENST00000583113 N/A N/A N/A N/A N/A 1.732±0.00 N/A N/A N/A N/A N/A 1.699±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005936 ENSMUST00000057174 N/A 3.581±0.66 N/A N/A N/A 3.232±0.00 N/A 3.277±0.36 4.396±1.48 N/A N/A N/A 9.392±4.97 5.292±0.53
ENSMUST00000117672 N/A N/A N/A N/A 6.552±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.861±0.00
ENSMUST00000118762 18.279±3.66 8.499±2.38 16.492±2.07 26.849±0.30 15.306±2.69 11.173±0.95 8.999±0.35 10.461±1.02 15.403±8.59 19.327±0.67 10.943±1.04 14.851±4.56 20.468±4.55 5.129±1.21
ENSMUST00000122163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.581±0.00 N/A N/A
ENSMUST00000150858 N/A N/A N/A 12.809±0.00 N/A N/A N/A N/A N/A N/A N/A 14.611±0.00 41.479±10.63 8.717±0.00
ENSMUST00000153462 N/A 15.548±4.28 N/A N/A 28.770±8.91 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153831 15.202±2.58 6.477±0.58 N/A N/A 16.779±0.00 N/A N/A N/A 6.760±0.00 N/A N/A 11.835±1.02 N/A N/A
ENSMUST00000168507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.899±0.40
ENSMUSG00000024006 ENSMUST00000009138 14.321±5.80 13.103±2.11 19.479±0.24 12.443±7.33 19.371±11.50 19.549±5.92 2.866±1.26 11.160±3.87 11.199±3.25 15.244±4.99 5.553±1.41 10.956±5.08 17.714±2.23 5.185±0.56
ENSMUST00000119274 N/A N/A N/A N/A N/A 9.146±0.00 N/A N/A N/A N/A N/A 9.349±3.62 27.741±0.32 N/A
ENSMUST00000125070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126893 N/A 42.174±0.00 N/A N/A 33.887±8.15 27.724±6.37 N/A N/A N/A N/A N/A 30.258±17.87 N/A N/A
ENSMUST00000129094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156732 23.614±2.26 20.965±1.01 N/A N/A 40.008±7.16 29.229±2.79 9.085±2.98 23.660±3.85 14.822±3.04 27.175±3.74 N/A 19.519±5.27 N/A 7.650±0.81
ENSMUSG00000084632 ENSMUST00000122683 N/A N/A 3.564±1.88 6.074±0.00 N/A N/A N/A N/A 1.752±0.63 N/A 0.802±0.00 3.565±0.79 0.384±0.00 2.505±0.00

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