C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bystin-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112578 BYSL 9606 + 6:41921188-41933046 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000230340 BYSL-001 41921188-41933046 protein_coding
  ENST00000372996 BYSL-006 41927435-41932996 nonsense_mediated_decay
  ENST00000475702 BYSL-005 41921550-41930357 retained_intron
  ENST00000489290 BYSL-004 41921534-41932655 nonsense_mediated_decay
  ENST00000494032 BYSL-003 41921530-41927644 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000230340ENST00000372996ENST00000475702ENST00000489290ENST00000494032
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000230340 1.110±0.00 1.784±0.00 0.323±0.00 N/A 2.518±0.00 0.485±0.00 0.737±0.50 1.050±0.00 0.265±0.00 N/A 4.847±0.00 7.781±6.60 5.768±1.46 3.282±1.11
ENST00000372996 1.509±0.00 3.489±0.00 N/A 1.919±0.00 N/A 2.601±0.00 1.980±0.00 1.614±1.36 5.065±0.00 2.702±2.28 10.384±6.82 2.991±0.00 2.718±1.57 2.153±0.00
ENST00000475702 2.764±0.00 N/A N/A N/A N/A 3.011±0.00 N/A N/A 0.313±0.00 N/A N/A N/A N/A N/A
ENST00000489290 2.514±0.00 2.703±0.00 N/A 1.232±0.00 1.361±0.00 2.630±0.00 N/A N/A 1.898±0.00 3.716±0.00 6.737±0.00 2.878±0.00 N/A 4.192±0.00
ENST00000494032 N/A N/A 0.822±0.00 N/A 1.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000462 IEA maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001701 IEA in utero embryonic development
GO:0001825 IEA blastocyst formation
GO:0001829 IEA trophectodermal cell differentiation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0007155 TAS cell adhesion
GO:0007565 TAS female pregnancy
GO:0008283 IEA cell proliferation
GO:0016020 IDA membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding
GO:0045177 IEA apical part of cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001057 bysl bystin-like protein_coding Danio_rerio
ENSMUSG00000023988 Bysl bystin-like protein_coding Mus_musculus

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