C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bystin-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000230340 BYSL-001 ENSG00000112578 9606 + 6:41921188-41933046 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000230340
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000230340 1.110±0.00 1.784±0.00 0.323±0.00 2.518±0.00 0.485±0.00 0.737±0.50 1.050±0.00 0.265±0.00 4.847±0.00 7.781±6.60 5.768±1.46 3.282±1.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000462 IEA maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001701 IEA in utero embryonic development
GO:0001825 IEA blastocyst formation
GO:0001829 IEA trophectodermal cell differentiation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0007155 TAS cell adhesion
GO:0007565 TAS female pregnancy
GO:0008283 IEA cell proliferation
GO:0016020 IDA membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding
GO:0045177 IEA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024783 Bysl-201 protein_coding Mus_musculus 0 1419
ENSMUST00000189015 RP23-31H15.2-001 processed_pseudogene Mus_musculus 0 436

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