C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 4, sodium bicarbonate cotransporter, member 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113073 SLC4A9 9606 + 5:140360202-140375143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000432095 SLC4A9-004 140360210-140375002 protein_coding
  ENST00000504742 SLC4A9-005 140371449-140374929 retained_intron
  ENST00000506545 SLC4A9-003 140360210-140374844 protein_coding
  ENST00000506757 SLC4A9-001 140360202-140375143 protein_coding
  ENST00000507527 SLC4A9-002 140360215-140375008 protein_coding
  ENST00000514849 SLC4A9-006 140365857-140367728 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungMuscleOvaryPlacentaENST00000504742ENST00000506545ENST00000506757ENST00000507527ENST00000514849
Transcript ID Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000504742 N/A N/A 5.298±0.00 0.354±0.28 N/A N/A 0.064±0.00 0.054±0.00
ENST00000506545 0.020±0.00 0.037±0.00 N/A N/A 0.136±0.00 0.034±0.00 0.067±0.00 0.051±0.00
ENST00000506757 N/A N/A 0.991±0.00 N/A N/A N/A N/A N/A
ENST00000507527 N/A N/A 1.659±0.00 N/A N/A N/A N/A N/A
ENST00000514849 N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZL CIL_0006ZL_0001 CGP 5:140332843-140375143
CIL_0006ZO CIL_0006ZO_0001 CGP 5:140360202-140539856

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005452 IEA inorganic anion exchanger activity
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006811 TAS ion transport
GO:0006820 IEA anion transport
GO:0008509 IEA anion transmembrane transporter activity
GO:0015701 TAS bicarbonate transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0045177 IEA apical part of cell
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000024485 Slc4a9 solute carrier family 4, sodium bicarbonate cotransporter, member 9 protein_coding Mus_musculus

Loading