C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4, sodium bicarbonate cotransporter, member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506545 SLC4A9-003 ENSG00000113073 9606 + 5:140360210-140374844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLungMuscleOvaryPlacentaENST00000506545
Transcript ID Breast Heart Lung Muscle Ovary Placenta
ENST00000506545 0.020±0.00 0.037±0.00 0.136±0.00 0.034±0.00 0.067±0.00 0.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZL CIL_0006ZL_0001 CGP 5:140332843-140375143
CIL_0006ZO CIL_0006ZO_0001 CGP 5:140360202-140539856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005452 IEA inorganic anion exchanger activity
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006811 TAS ion transport
GO:0006820 IEA anion transport
GO:0008509 IEA anion transmembrane transporter activity
GO:0015701 TAS bicarbonate transport
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115694 Slc4a9-202 protein_coding Mus_musculus 0 1417
ENSMUST00000074298 Slc4a9-201 protein_coding Mus_musculus 0 1170
ENSDART00000091923 SLC4A10 (2 of 2)-201 protein_coding Danio_rerio 0.000000007 68

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