C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin domain containing 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113621 TXNDC15 9606 + 5:134873803-134901525 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358387 TXNDC15-001 134873803-134901525 protein_coding
  ENST00000502625 TXNDC15-009 134899937-134901511 processed_transcript
  ENST00000505174 TXNDC15-003 134892178-134899899 retained_intron
  ENST00000506350 TXNDC15-010 134888153-134896276 processed_transcript
  ENST00000506916 TXNDC15-007 134874376-134888062 protein_coding
  ENST00000507024 TXNDC15-005 134874397-134901511 nonsense_mediated_decay
  ENST00000508779 TXNDC15-004 134875342-134900128 protein_coding
  ENST00000508810 TXNDC15-006 134875096-134888180 protein_coding
  ENST00000509954 TXNDC15-008 134893626-134899857 protein_coding
  ENST00000511070 TXNDC15-002 134874371-134900039 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358387ENST00000502625ENST00000505174ENST00000506916ENST00000507024ENST00000508779ENST00000508810ENST00000509954ENST00000511070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358387 N/A N/A 1.302±0.00 3.391±0.00 1.542±0.00 2.703±0.00 1.161±0.00 1.222±0.00 2.256±0.00 1.375±0.00 0.896±0.00 2.513±1.53 4.336±0.84 2.696±0.00
ENST00000502625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.704±0.00 N/A N/A
ENST00000505174 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.750±0.00 N/A N/A N/A N/A
ENST00000506916 N/A N/A N/A N/A N/A N/A 5.194±0.00 N/A N/A N/A N/A 10.649±0.00 26.321±0.00 N/A
ENST00000507024 6.128±0.00 7.425±0.00 N/A 5.435±0.00 5.000±0.00 4.310±2.54 6.664±0.00 13.294±0.00 2.946±1.06 3.893±0.60 4.757±0.00 9.185±0.50 5.024±0.47 13.768±0.00
ENST00000508779 N/A N/A 1.357±0.00 3.299±0.00 1.736±0.00 N/A 5.762±0.00 3.803±0.00 N/A N/A 1.972±0.00 4.526±2.32 10.120±3.24 8.387±0.00
ENST00000508810 N/A N/A N/A N/A 6.307±0.00 N/A N/A N/A N/A 7.053±0.00 N/A N/A 21.061±0.00 N/A
ENST00000509954 N/A N/A N/A N/A N/A N/A N/A N/A 8.723±0.00 8.649±0.00 3.851±0.00 13.413±0.00 36.090±0.00 24.774±0.00
ENST00000511070 12.175±0.00 12.960±0.00 1.776±0.00 9.658±3.82 7.642±2.69 13.968±0.00 2.955±0.00 13.610±0.00 6.170±1.09 4.144±0.00 5.390±0.00 16.196±0.00 N/A 20.187±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JT CIL_0007JT_0002 UCNEbase 5:134524545-135264654
CIL_0009AP CIL_0009AP_0001 VISTA 5:134719818-135321709
CIL_0005XT CIL_0005XT_0001 CGP 5:134845680-134901525
CIL_0005XS CIL_0005XS_0001 CGP 5:134873803-135007959

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043249 TXNDC15 thioredoxin domain containing 15 protein_coding Danio_rerio
ENSMUSG00000021497 Txndc15 thioredoxin domain containing 15 protein_coding Mus_musculus

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