C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: arginyl-tRNA synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113643 RARS 9606 + 5:168486445-168519299 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000231572 RARS-001 168486445-168519299 protein_coding
  ENST00000518757 RARS-008 168497012-168506030 retained_intron
  ENST00000519346 RARS-007 168488692-168495151 retained_intron
  ENST00000520013 RARS-002 168486491-168519298 nonsense_mediated_decay
  ENST00000520421 RARS-009 168497218-168502035 processed_transcript
  ENST00000521329 RARS-004 168486470-168493958 nonsense_mediated_decay
  ENST00000521939 RARS-006 168486486-168494736 retained_intron
  ENST00000522834 RARS-005 168486482-168495333 nonsense_mediated_decay
  ENST00000524082 RARS-003 168486451-168493187 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000231572ENST00000520013ENST00000521939ENST00000524082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000231572 11.252±0.00 7.693±0.00 4.206±0.00 5.350±3.77 11.251±1.54 8.737±1.15 7.483±1.39 12.054±4.58 6.206±2.49 5.543±2.86 6.940±0.00 14.540±3.90 12.893±3.52 15.021±0.00
ENST00000520013 2.360±0.00 4.369±0.00 N/A 4.269±0.00 5.636±0.00 3.012±0.29 1.873±0.00 1.899±0.00 3.501±0.00 2.293±0.00 2.845±0.00 5.322±0.00 6.880±2.73 4.018±0.15
ENST00000521939 N/A N/A N/A 6.858±0.00 N/A N/A N/A N/A N/A 8.311±0.00 1.516±0.00 N/A N/A N/A
ENST00000524082 N/A N/A N/A N/A N/A 6.747±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0000166 IEA nucleotide binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004814 TAS:IEA arginine-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006420 IEA arginyl-tRNA aminoacylation
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0017101 IEA aminoacyl-tRNA synthetase multienzyme complex
GO:0034618 IEA arginine binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054530 rars arginyl-tRNA synthetase protein_coding Danio_rerio
ENSMUSG00000018848 Rars arginyl-tRNA synthetase protein_coding Mus_musculus

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