C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000231572 RARS-001 ENSG00000113643 9606 + 5:168486445-168519299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000231572
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000231572 11.252±0.00 7.693±0.00 4.206±0.00 5.350±3.77 11.251±1.54 8.737±1.15 7.483±1.39 12.054±4.58 6.206±2.49 5.543±2.86 6.940±0.00 14.540±3.90 12.893±3.52 15.021±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0000166 IEA nucleotide binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004814 TAS:IEA arginine-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006420 IEA arginyl-tRNA aminoacylation
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0017101 IEA aminoacyl-tRNA synthetase multienzyme complex
GO:0034618 IEA arginine binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018992 Rars-001 protein_coding Mus_musculus 0 2292
ENSMUST00000143205 Rars-002 processed_transcript Mus_musculus 0 542
ENSMUST00000166122 Rars-004 retained_intron Mus_musculus 0 303

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