C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: casein kinase 1, alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113712 CSNK1A1 9606 - 5:149492197-149551552 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261798 CSNK1A1-001 149492197-149551397 protein_coding
  ENST00000377843 CSNK1A1-201 149495896-149551552 protein_coding
  ENST00000412431 CSNK1A1-202 149493386-149501253 protein_coding
  ENST00000503350 CSNK1A1-006 149504846-149513157 protein_coding
  ENST00000504676 CSNK1A1-002 149496054-149550299 protein_coding
  ENST00000515435 CSNK1A1-004 149496054-149550299 protein_coding
  ENST00000515748 CSNK1A1-005 149549328-149551168 protein_coding
  ENST00000515768 CSNK1A1-003 149496853-149550964 protein_coding
  ENST00000523203 CSNK1A1-007 149525135-149551356 nonsense_mediated_decay
  ENST00000606299 CSNK1A1-009 149504846-149513212 protein_coding
  ENST00000606719 CSNK1A1-008 149496588-149513221 protein_coding
  ENST00000606826 CSNK1A1-010 149499163-149513120 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261798ENST00000377843ENST00000412431ENST00000504676ENST00000515768ENST00000606719
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261798 11.828±0.00 N/A 1.496±0.00 7.366±1.26 6.953±1.08 8.277±0.00 4.523±0.00 3.576±0.00 8.327±0.00 6.696±0.00 1.661±0.00 5.433±1.02 N/A 8.034±0.00
ENST00000377843 32.087±0.00 14.392±0.00 3.765±0.00 16.249±0.00 14.867±3.87 13.857±0.00 4.684±0.00 5.201±0.00 15.144±0.00 N/A N/A 20.653±6.56 21.085±7.66 32.267±3.48
ENST00000412431 12.446±0.00 N/A N/A 9.038±0.00 8.346±0.00 N/A N/A N/A 3.211±0.00 N/A N/A 10.752±1.58 15.222±0.00 12.295±0.00
ENST00000504676 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.617±0.00 5.536±0.00 14.186±1.83 18.433±7.61 22.367±0.00
ENST00000515768 N/A N/A 6.446±0.00 30.444±0.00 21.830±0.00 N/A 11.090±0.00 10.308±0.00 N/A N/A 14.580±0.00 17.839±0.00 N/A N/A
ENST00000606719 N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.669±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZC CIL_0007ZC_0001 VISTA 5:149122130-149725513
CIL_000851 CIL_000851_0001 VISTA 5:149141792-149745303

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0004672 ISS:IEA protein kinase activity
GO:0004674 IEA:IDA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005847 IDA mRNA cleavage and polyadenylation specificity factor complex
GO:0006468 IEA:IDA protein phosphorylation
GO:0007067 IEA mitotic nuclear division
GO:0007165 NAS signal transduction
GO:0007166 TAS cell surface receptor signaling pathway
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016055 IEA Wnt signaling pathway
GO:0016607 IDA nuclear speck
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007993 csnk1a1 casein kinase 1, alpha 1 protein_coding Danio_rerio
ENSDARG00000052674 csnk1a1 casein kinase 1, alpha 1 protein_coding Danio_rerio

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