C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377843 CSNK1A1-201 ENSG00000113712 9606 - 5:149495896-149551552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000377843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000377843 32.087±0.00 14.392±0.00 3.765±0.00 16.249±0.00 14.867±3.87 13.857±0.00 4.684±0.00 5.201±0.00 15.144±0.00 20.653±6.56 21.085±7.66 32.267±3.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZC CIL_0007ZC_0001 VISTA 5:149122130-149725513
CIL_000851 CIL_000851_0001 VISTA 5:149141792-149745303

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0004672 ISS:IEA protein kinase activity
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005847 IDA mRNA cleavage and polyadenylation specificity factor complex
GO:0006468 IDA:IEA protein phosphorylation
GO:0007067 IEA mitotic nuclear division
GO:0007165 NAS signal transduction
GO:0007166 TAS cell surface receptor signaling pathway
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016055 IEA Wnt signaling pathway
GO:0016607 IDA nuclear speck
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165721 Csnk1a1-002 protein_coding Mus_musculus 0 3046
ENSMUST00000170862 Csnk1a1-007 protein_coding Mus_musculus 0 1919
ENSMUST00000165123 Csnk1a1-001 protein_coding Mus_musculus 0 1821
ENSMUST00000163205 Csnk1a1-005 protein_coding Mus_musculus 0 1797
ENSMUST00000166990 Csnk1a1-004 protein_coding Mus_musculus 0 1796
ENSMUST00000115246 Csnk1a1-003 protein_coding Mus_musculus 0 1746
ENSDART00000130655 csnk1a1-204 protein_coding Danio_rerio 0 924
ENSDART00000052520 csnk1a1-202 protein_coding Danio_rerio 0 924
ENSMUST00000167187 Csnk1a1-009 protein_coding Mus_musculus 0 839
ENSMUST00000164253 Csnk1a1-010 protein_coding Mus_musculus 0 715
ENSDART00000121429 csnk1a1-203 protein_coding Danio_rerio 0 606
ENSDART00000009443 csnk1a1-201 protein_coding Danio_rerio 0 606
ENSMUST00000165381 Csnk1a1-006 retained_intron Mus_musculus 0 527
ENSMUST00000122198 Gm13366-001 processed_pseudogene Mus_musculus 0 484

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