C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgi reassembly stacking protein 1, 65kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114745 GORASP1 9606 - 3:39096659-39108363 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319283 GORASP1-001 39096659-39108363 protein_coding
  ENST00000411813 GORASP1-011 39101023-39107635 protein_coding
  ENST00000413243 GORASP1-012 39102677-39107633 nonsense_mediated_decay
  ENST00000416741 GORASP1-022 39101023-39107140 protein_coding
  ENST00000419156 GORASP1-024 39099411-39103511 nonsense_mediated_decay
  ENST00000422110 GORASP1-004 39096668-39107638 protein_coding
  ENST00000427459 GORASP1-019 39099168-39107608 protein_coding
  ENST00000431601 GORASP1-008 39097459-39107336 nonsense_mediated_decay
  ENST00000437458 GORASP1-021 39100852-39107181 protein_coding
  ENST00000441081 GORASP1-009 39102754-39107863 protein_coding
  ENST00000441302 GORASP1-003 39096659-39107638 retained_intron
  ENST00000452389 GORASP1-005 39096665-39107621 nonsense_mediated_decay
  ENST00000453680 GORASP1-007 39096665-39107569 nonsense_mediated_decay
  ENST00000466443 GORASP1-010 39100435-39107638 retained_intron
  ENST00000469471 GORASP1-013 39103174-39107630 retained_intron
  ENST00000470910 GORASP1-006 39099399-39107579 retained_intron
  ENST00000473827 GORASP1-018 39100662-39107611 retained_intron
  ENST00000476334 GORASP1-027 39098387-39099209 processed_transcript
  ENST00000479124 GORASP1-025 39100792-39101472 processed_transcript
  ENST00000479927 GORASP1-002 39098028-39107640 protein_coding
  ENST00000486133 GORASP1-023 39102840-39103725 processed_transcript
  ENST00000488479 GORASP1-016 39100457-39107614 retained_intron
  ENST00000489587 GORASP1-026 39099435-39100636 processed_transcript
  ENST00000492064 GORASP1-017 39102598-39107611 retained_intron
  ENST00000493751 GORASP1-015 39102828-39107627 processed_transcript
  ENST00000493851 GORASP1-020 39102480-39107585 retained_intron
  ENST00000493938 GORASP1-014 39102783-39107627 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000422110ENST00000441302ENST00000452389ENST00000453680
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000422110 N/A 11.700±0.00 19.072±0.00 8.125±0.00 7.176±0.00 5.206±0.00 9.937±0.00 7.016±0.00 N/A 6.743±0.00 15.183±2.51 8.152±1.86
ENST00000441302 N/A 6.312±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452389 5.021±0.00 N/A 3.363±0.00 N/A N/A N/A N/A N/A N/A 1.750±0.00 N/A N/A
ENST00000453680 N/A N/A N/A N/A 5.020±0.00 4.695±0.00 N/A 4.645±0.00 9.186±0.00 5.388±0.00 7.120±0.00 10.714±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H1 CIL_0006H1_0001 CGP 3:38845769-39096671
CIL_0006HJ CIL_0006HJ_0001 CGP 3:39096659-39138903

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0000278 TAS mitotic cell cycle
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0007030 ISS Golgi organization
GO:0015031 IEA protein transport
GO:0050774 IMP negative regulation of dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003068 gorasp1 golgi reassembly stacking protein 1 protein_coding Danio_rerio
ENSDARG00000086177 GORASP1 (2 of 3) golgi reassembly stacking protein 1, 65kDa protein_coding Danio_rerio
ENSDARG00000090773 CU633479.5 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000032513 Gorasp1 golgi reassembly stacking protein 1 protein_coding Mus_musculus

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