C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114770 ABCC5 9606 - 3:183919934-184018015 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265586 ABCC5-201 183919938-184017939 protein_coding
  ENST00000334444 ABCC5-001 183919934-184018015 protein_coding
  ENST00000382494 ABCC5-005 183983753-184017889 protein_coding
  ENST00000392579 ABCC5-004 183983753-184017889 protein_coding
  ENST00000427120 ABCC5-006 183983753-184017863 protein_coding
  ENST00000437205 ABCC5-007 183919939-184017836 nonsense_mediated_decay
  ENST00000437341 ABCC5-010 183988573-184017444 protein_coding
  ENST00000438979 ABCC5-009 183987771-184017916 nonsense_mediated_decay
  ENST00000443376 ABCC5-003 183983753-184017889 nonsense_mediated_decay
  ENST00000443497 ABCC5-013 183925660-183942780 nonsense_mediated_decay
  ENST00000446941 ABCC5-002 184000663-184017939 protein_coding
  ENST00000476402 ABCC5-012 183967304-183971831 retained_intron
  ENST00000492216 ABCC5-011 183977518-183983576 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265586ENST00000334444ENST00000382494ENST00000392579ENST00000427120ENST00000437205
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265586 N/A N/A N/A N/A N/A 0.618±0.07 N/A N/A 1.771±0.00 0.935±0.00 N/A N/A N/A 2.909±0.00
ENST00000334444 0.704±0.00 N/A 1.491±0.00 3.963±1.28 1.941±0.00 0.697±0.06 1.947±0.86 6.399±0.00 0.875±0.00 0.500±0.21 4.338±0.00 1.394±0.65 1.127±0.43 2.031±0.00
ENST00000382494 N/A 1.186±0.00 N/A N/A 2.046±0.00 0.905±0.00 N/A N/A 0.374±0.00 0.938±0.00 N/A 2.965±0.00 1.763±0.22 N/A
ENST00000392579 N/A N/A N/A N/A N/A N/A N/A 0.882±0.00 N/A N/A N/A N/A N/A N/A
ENST00000427120 0.233±0.00 0.605±0.00 3.731±0.00 2.212±0.41 2.292±1.50 0.982±0.00 1.954±0.38 3.029±0.00 2.357±0.00 0.298±0.00 1.961±0.00 2.601±0.86 N/A 3.041±0.00
ENST00000437205 N/A N/A N/A N/A 0.615±0.00 N/A N/A N/A N/A N/A 2.657±0.00 2.360±0.71 0.781±0.00 2.443±1.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006200 IEA ATP catabolic process
GO:0006810 TAS:IEA transport
GO:0008514 TAS organic anion transmembrane transporter activity
GO:0015711 TAS organic anion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030212 TAS hyaluronan metabolic process
GO:0030213 TAS hyaluronan biosynthetic process
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0044281 TAS small molecule metabolic process
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061233 abcc5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 protein_coding Danio_rerio
ENSMUSG00000022822 Abcc5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 protein_coding Mus_musculus

Loading