C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022822 Abcc5 10090 - 16:20331303-20426394 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077867 Abcc5-004 20392675-20425986 protein_coding
  ENSMUST00000079158 Abcc5-001 20331303-20426394 protein_coding
  ENSMUST00000096199 Abcc5-002 20400761-20426354 protein_coding
  ENSMUST00000115547 Abcc5-201 20331306-20426335 protein_coding
  ENSMUST00000127582 Abcc5-007 20368877-20376642 retained_intron
  ENSMUST00000128978 Abcc5-006 20398817-20400286 retained_intron
  ENSMUST00000131453 Abcc5-009 20400762-20404713 processed_transcript
  ENSMUST00000134413 Abcc5-005 20331308-20399621 retained_intron
  ENSMUST00000134962 Abcc5-003 20400760-20426324 retained_intron
  ENSMUST00000137985 Abcc5-008 20344683-20364200 retained_intron
  ENSMUST00000148003 Abcc5-010 20338929-20364006 processed_transcript
  ENSMUST00000150340 Abcc5-011 20378484-20396403 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079158ENSMUST00000096199ENSMUST00000115547ENSMUST00000134413ENSMUST00000134962
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079158 5.611±1.31 3.680±0.20 5.907±0.22 7.924±1.75 3.446±0.16 1.353±0.59 N/A 3.711±0.91 2.005±0.89 4.874±0.15 4.787±1.23 5.150±1.67 7.766±3.99 1.450±0.51
ENSMUST00000096199 N/A N/A N/A N/A 26.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.311±0.00 4.270±0.00 2.895±0.00 N/A
ENSMUST00000134413 6.759±1.57 6.565±1.89 8.703±0.00 15.637±2.58 8.401±3.20 2.657±1.27 3.794±0.80 4.384±2.96 1.247±0.74 9.903±5.08 1.508±0.00 5.492±1.54 9.769±4.72 0.986±0.47
ENSMUST00000134962 11.055±1.23 7.440±0.81 12.231±1.68 9.052±2.77 7.633±0.49 1.739±0.45 3.953±0.87 3.419±0.82 1.579±1.18 11.046±1.98 2.509±0.55 9.004±2.13 5.612±3.14 0.931±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061233 abcc5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 protein_coding Danio_rerio
ENSG00000114770 ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 protein_coding Homo_sapiens

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