C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vasoactive intestinal peptide receptor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114812 VIPR1 9606 + 3:42489299-42537573 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325123 VIPR1-001 42502623-42537567 protein_coding
  ENST00000433647 VIPR1-002 42489299-42537567 protein_coding
  ENST00000436487 VIPR1-012 42502612-42532310 nonsense_mediated_decay
  ENST00000438259 VIPR1-201 42502612-42537573 protein_coding
  ENST00000439731 VIPR1-013 42502623-42530932 protein_coding
  ENST00000439910 VIPR1-004 42502617-42536544 nonsense_mediated_decay
  ENST00000443646 VIPR1-003 42502612-42536394 nonsense_mediated_decay
  ENST00000446673 VIPR1-014 42502664-42532333 nonsense_mediated_decay
  ENST00000450274 VIPR1-011 42501912-42527496 protein_coding
  ENST00000465338 VIPR1-017 42529734-42531526 retained_intron
  ENST00000473495 VIPR1-008 42489480-42500416 processed_transcript
  ENST00000473575 VIPR1-015 42513799-42527899 processed_transcript
  ENST00000487545 VIPR1-010 42489494-42519314 processed_transcript
  ENST00000490161 VIPR1-009 42489483-42500146 processed_transcript
  ENST00000495189 VIPR1-016 42527653-42530897 retained_intron
  ENST00000498102 VIPR1-007 42532866-42537567 retained_intron
  ENST00000543411 VIPR1-202 42502612-42537573 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325123ENST00000436487ENST00000438259ENST00000439731ENST00000439910ENST00000443646ENST00000450274ENST00000498102ENST00000543411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325123 0.555±0.00 N/A N/A 0.875±0.00 3.818±1.11 1.518±0.71 0.450±0.00 1.481±0.00 5.139±0.00 20.123±0.48 N/A 0.698±0.00 1.567±1.11 0.701±0.00
ENST00000436487 N/A N/A 0.131±0.00 N/A N/A N/A 0.296±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000438259 N/A 1.761±0.00 N/A 2.407±0.00 2.153±0.54 2.129±0.03 N/A 3.150±0.00 N/A N/A 0.427±0.00 1.689±0.00 N/A 0.738±0.29
ENST00000439731 N/A N/A N/A N/A N/A N/A 0.293±0.00 N/A N/A N/A N/A 0.220±0.00 N/A N/A
ENST00000439910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.345±0.27 N/A N/A
ENST00000443646 1.843±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450274 N/A N/A 1.096±0.00 N/A N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000498102 N/A 0.517±0.00 N/A N/A 1.058±0.18 1.347±0.84 0.083±0.00 0.268±0.00 0.633±0.43 N/A N/A 0.329±0.30 N/A 0.368±0.00
ENST00000543411 N/A 1.154±0.00 N/A N/A 1.946±0.00 N/A N/A N/A N/A N/A N/A 0.561±0.46 0.657±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047X CIL_00047X_0001 CGP 3:42397078-42537573
CIL_000480 CIL_000480_0001 CGP 3:42489299-42601080

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0004999 IEA vasoactive intestinal polypeptide receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006936 TAS muscle contraction
GO:0006955 TAS immune response
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA:TAS G-protein coupled receptor signaling pathway
GO:0007187 TAS G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger
GO:0007268 TAS synaptic transmission
GO:0007586 TAS digestion
GO:0008284 TAS positive regulation of cell proliferation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0043235 IDA receptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028878 vipr1a vasoactive intestinal peptide receptor 1a protein_coding Danio_rerio
ENSDARG00000059058 vipr1b vasoactive intestinal peptide receptor 1b protein_coding Danio_rerio
ENSMUSG00000032528 Vipr1 vasoactive intestinal peptide receptor 1 protein_coding Mus_musculus

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