C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000480_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114812-ENSG00000093183 CGP 9606 3:42489299-42601080
GeneTranscriptPositionBiotype
ENSG00000008324 (SS18L2)
synovial sarcoma translocation gene on chromosome 18-like 2
ENST00000011691 (SS18L2-201) 42590806-42594998 protein_coding
ENST00000447630 (SS18L2-001) 42581840-42595114 protein_coding
ENST00000474941 (SS18L2-002) 42591274-42594660 retained_intron
ENSG00000114812 (VIPR1)
vasoactive intestinal peptide receptor 1
ENST00000325123 (VIPR1-001) 42502623-42537567 protein_coding
ENST00000433647 (VIPR1-002) 42489299-42537567 protein_coding
ENST00000436487 (VIPR1-012) 42502612-42532310 nonsense_mediated_decay
ENST00000438259 (VIPR1-201) 42502612-42537573 protein_coding
ENST00000439731 (VIPR1-013) 42502623-42530932 protein_coding
ENST00000439910 (VIPR1-004) 42502617-42536544 nonsense_mediated_decay
ENST00000443646 (VIPR1-003) 42502612-42536394 nonsense_mediated_decay
ENST00000446673 (VIPR1-014) 42502664-42532333 nonsense_mediated_decay
ENST00000450274 (VIPR1-011) 42501912-42527496 protein_coding
ENST00000465338 (VIPR1-017) 42529734-42531526 retained_intron
ENST00000473495 (VIPR1-008) 42489480-42500416 processed_transcript
ENST00000473575 (VIPR1-015) 42513799-42527899 processed_transcript
ENST00000487545 (VIPR1-010) 42489494-42519314 processed_transcript
ENST00000490161 (VIPR1-009) 42489483-42500146 processed_transcript
ENST00000495189 (VIPR1-016) 42527653-42530897 retained_intron
ENST00000498102 (VIPR1-007) 42532866-42537567 retained_intron
ENST00000543411 (VIPR1-202) 42502612-42537573 protein_coding
ENSG00000114857 (NKTR)
natural killer cell triggering receptor
ENST00000232978 (NKTR-001) 42600614-42648741 protein_coding
ENST00000429888 (NKTR-003) 42600682-42648735 nonsense_mediated_decay
ENST00000442970 (NKTR-005) 42600743-42620316 protein_coding
ENST00000445842 (NKTR-010) 42600761-42620043 protein_coding
ENST00000459950 (NKTR-004) 42600718-42603056 retained_intron
ENST00000460807 (NKTR-013) 42633209-42637000 retained_intron
ENST00000460910 (NKTR-009) 42600660-42611184 processed_transcript
ENST00000464315 (NKTR-017) 42633637-42635057 retained_intron
ENST00000465584 (NKTR-007) 42619819-42638219 retained_intron
ENST00000466553 (NKTR-016) 42621005-42631316 retained_intron
ENST00000468735 (NKTR-002) 42600655-42638226 retained_intron
ENST00000472127 (NKTR-012) 42631033-42633112 retained_intron
ENST00000472258 (NKTR-014) 42635080-42637156 retained_intron
ENST00000478488 (NKTR-011) 42600980-42627468 retained_intron
ENST00000487466 (NKTR-006) 42600672-42627310 retained_intron
ENST00000490189 (NKTR-015) 42643652-42646116 retained_intron
ENST00000498730 (NKTR-008) 42627186-42637035 retained_intron
ENST00000508351 (NKTR-018) 42633209-42635481 retained_intron
ENST00000617821 (NKTR-201) 42600686-42648733 protein_coding
ENSG00000232354 (VIPR1-AS1)
VIPR1 antisense RNA 1
ENST00000452639 (VIPR1-AS1-001) 42506650-42533231 antisense
ENST00000593611 (VIPR1-AS1-008) 42516727-42532062 antisense
ENST00000593621 (VIPR1-AS1-007) 42513605-42532062 antisense
ENST00000596630 (VIPR1-AS1-005) 42512094-42532062 antisense
ENST00000598837 (VIPR1-AS1-003) 42506692-42532062 antisense
ENST00000600342 (VIPR1-AS1-002) 42506524-42532062 antisense
ENST00000601312 (VIPR1-AS1-006) 42512184-42532062 antisense
ENST00000602176 (VIPR1-AS1-004) 42509305-42532062 antisense
ENST00000608869 (VIPR1-AS1-009) 42532021-42533258 antisense
ENST00000610022 (VIPR1-AS1-010) 42532029-42533257 antisense
CIL_000480_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032528-ENSMUSG00000061536 CGP 10090 9:121642716-121705490
GeneTranscriptPositionBiotype
ENSMUSG00000032528 (Vipr1)
vasoactive intestinal peptide receptor 1
ENSMUST00000035115 (Vipr1-001) 121642716-121672954 protein_coding
ENSMUST00000129394 (Vipr1-003) 121664615-121665907 retained_intron
ENSMUST00000139189 (Vipr1-002) 121643051-121660225 processed_transcript
ENSMUST00000149959 (Vipr1-004) 121668713-121669509 retained_intron
ENSMUSG00000061536 (Sec22c)
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
ENSMUST00000078547 (Sec22c-201) 121680047-121705029 protein_coding
ENSMUST00000111560 (Sec22c-001) 121683022-121705465 protein_coding
ENSMUST00000132733 (Sec22c-004) 121688198-121690473 retained_intron
ENSMUST00000139193 (Sec22c-003) 121684551-121704979 nonsense_mediated_decay
ENSMUST00000154978 (Sec22c-002) 121695616-121705490 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000480_0001ENSG00000008324ENST00000011691ENSG00000114812ENST00000325123ENST00000436487ENST00000438259ENST00000439731ENST00000439910ENST00000443646ENST00000450274ENST00000498102ENST00000543411ENSG00000114857ENST00000232978ENST00000429888ENST00000468735ENST00000498730ENST00000617821ENSG00000232354ENST00000452639ENST00000596630ENST00000600342CIL_000480_0002ENSMUSG00000032528ENSMUST00000035115ENSMUSG00000061536ENSMUST00000078547ENSMUST00000111560ENSMUST00000139193
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008324 ENST00000011691 N/A N/A N/A N/A N/A 11.484±0.00 N/A N/A 10.311±0.00 24.783±0.00 7.643±0.00 N/A 6.776±0.00 N/A
ENST00000447630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000114812 ENST00000325123 0.555±0.00 N/A N/A 0.875±0.00 3.818±1.11 1.518±0.71 0.450±0.00 1.481±0.00 5.139±0.00 20.123±0.48 N/A 0.698±0.00 1.567±1.11 0.701±0.00
ENST00000433647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436487 N/A N/A 0.131±0.00 N/A N/A N/A 0.296±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000438259 N/A 1.761±0.00 N/A 2.407±0.00 2.153±0.54 2.129±0.03 N/A 3.150±0.00 N/A N/A 0.427±0.00 1.689±0.00 N/A 0.738±0.29
ENST00000439731 N/A N/A N/A N/A N/A N/A 0.293±0.00 N/A N/A N/A N/A 0.220±0.00 N/A N/A
ENST00000439910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.345±0.27 N/A N/A
ENST00000443646 1.843±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450274 N/A N/A 1.096±0.00 N/A N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000465338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498102 N/A 0.517±0.00 N/A N/A 1.058±0.18 1.347±0.84 0.083±0.00 0.268±0.00 0.633±0.43 N/A N/A 0.329±0.30 N/A 0.368±0.00
ENST00000543411 N/A 1.154±0.00 N/A N/A 1.946±0.00 N/A N/A N/A N/A N/A N/A 0.561±0.46 0.657±0.00 N/A
ENSG00000114857 ENST00000232978 N/A 8.624±0.00 2.113±0.00 3.704±0.86 3.979±0.00 3.640±0.72 2.260±0.72 2.424±0.17 3.228±0.92 5.113±0.00 1.043±0.00 7.881±2.04 2.564±1.17 10.912±6.39
ENST00000429888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.150±0.00 N/A N/A
ENST00000442970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468735 N/A N/A 2.076±0.00 2.524±0.00 5.429±0.00 N/A N/A 1.959±0.00 4.094±0.00 8.960±0.00 N/A 4.320±0.00 N/A N/A
ENST00000472127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498730 N/A N/A 3.882±0.00 N/A 9.004±0.00 7.091±0.00 N/A 3.634±0.00 5.254±0.00 11.531±0.00 0.680±0.00 N/A N/A N/A
ENST00000508351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.223±0.00 N/A N/A 7.952±0.00
ENSG00000232354 ENST00000452639 N/A N/A N/A N/A 2.029±0.00 2.536±0.00 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000593611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.540±0.00
ENST00000598837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A
ENST00000601312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032528 ENSMUST00000035115 0.552±0.14 0.193±0.07 1.002±0.24 0.820±0.97 4.741±1.73 58.038±3.42 0.158±0.04 0.685±0.09 4.196±3.96 0.719±0.30 0.543±0.11 0.816±0.14 0.042±0.01 0.171±0.06
ENSMUST00000129394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061536 ENSMUST00000078547 1.815±0.79 3.003±0.44 1.592±0.28 4.224±2.15 1.475±0.48 2.712±0.33 1.090±0.26 1.915±0.17 1.538±0.64 3.110±0.26 1.256±0.42 4.070±2.15 1.076±0.71 1.107±0.30
ENSMUST00000111560 N/A 1.080±0.39 N/A N/A N/A 0.798±0.12 N/A 0.478±0.00 0.399±0.00 0.736±0.00 0.388±0.00 N/A 0.436±0.19 0.983±0.43
ENSMUST00000132733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139193 N/A N/A N/A N/A N/A N/A 1.280±0.00 N/A N/A N/A N/A N/A N/A 1.999±0.08
ENSMUST00000154978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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