C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_000480_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000114812-ENSG00000093183 | CGP | 9606 | 3:42489299-42601080  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000008324  (SS18L2)synovial sarcoma translocation gene on chromosome 18-like 2 |
ENST00000011691 (SS18L2-201)
|
42590806-42594998 | protein_coding | |
|
ENST00000447630 (SS18L2-001)
|
42581840-42595114 | protein_coding | ||
|
ENST00000474941 (SS18L2-002)
|
42591274-42594660 | retained_intron | ||
|
ENSG00000114812 (VIPR1) vasoactive intestinal peptide receptor 1 |
ENST00000325123 (VIPR1-001)
|
42502623-42537567 | protein_coding | |
|
ENST00000433647 (VIPR1-002)
|
42489299-42537567 | protein_coding | ||
|
ENST00000436487 (VIPR1-012)
|
42502612-42532310 | nonsense_mediated_decay | ||
|
ENST00000438259 (VIPR1-201)
|
42502612-42537573 | protein_coding | ||
|
ENST00000439731 (VIPR1-013)
|
42502623-42530932 | protein_coding | ||
|
ENST00000439910 (VIPR1-004)
|
42502617-42536544 | nonsense_mediated_decay | ||
|
ENST00000443646 (VIPR1-003)
|
42502612-42536394 | nonsense_mediated_decay | ||
|
ENST00000446673 (VIPR1-014)
|
42502664-42532333 | nonsense_mediated_decay | ||
|
ENST00000450274 (VIPR1-011)
|
42501912-42527496 | protein_coding | ||
|
ENST00000465338 (VIPR1-017)
|
42529734-42531526 | retained_intron | ||
|
ENST00000473495 (VIPR1-008)
|
42489480-42500416 | processed_transcript | ||
|
ENST00000473575 (VIPR1-015)
|
42513799-42527899 | processed_transcript | ||
|
ENST00000487545 (VIPR1-010)
|
42489494-42519314 | processed_transcript | ||
|
ENST00000490161 (VIPR1-009)
|
42489483-42500146 | processed_transcript | ||
|
ENST00000495189 (VIPR1-016)
|
42527653-42530897 | retained_intron | ||
|
ENST00000498102 (VIPR1-007)
|
42532866-42537567 | retained_intron | ||
|
ENST00000543411 (VIPR1-202)
|
42502612-42537573 | protein_coding | ||
|
ENSG00000114857 (NKTR) natural killer cell triggering receptor |
ENST00000232978 (NKTR-001)
|
42600614-42648741 | protein_coding | |
|
ENST00000429888 (NKTR-003)
|
42600682-42648735 | nonsense_mediated_decay | ||
|
ENST00000442970 (NKTR-005)
|
42600743-42620316 | protein_coding | ||
|
ENST00000445842 (NKTR-010)
|
42600761-42620043 | protein_coding | ||
|
ENST00000459950 (NKTR-004)
|
42600718-42603056 | retained_intron | ||
|
ENST00000460807 (NKTR-013)
|
42633209-42637000 | retained_intron | ||
|
ENST00000460910 (NKTR-009)
|
42600660-42611184 | processed_transcript | ||
|
ENST00000464315 (NKTR-017)
|
42633637-42635057 | retained_intron | ||
|
ENST00000465584 (NKTR-007)
|
42619819-42638219 | retained_intron | ||
|
ENST00000466553 (NKTR-016)
|
42621005-42631316 | retained_intron | ||
|
ENST00000468735 (NKTR-002)
|
42600655-42638226 | retained_intron | ||
|
ENST00000472127 (NKTR-012)
|
42631033-42633112 | retained_intron | ||
|
ENST00000472258 (NKTR-014)
|
42635080-42637156 | retained_intron | ||
|
ENST00000478488 (NKTR-011)
|
42600980-42627468 | retained_intron | ||
|
ENST00000487466 (NKTR-006)
|
42600672-42627310 | retained_intron | ||
|
ENST00000490189 (NKTR-015)
|
42643652-42646116 | retained_intron | ||
|
ENST00000498730 (NKTR-008)
|
42627186-42637035 | retained_intron | ||
|
ENST00000508351 (NKTR-018)
|
42633209-42635481 | retained_intron | ||
|
ENST00000617821 (NKTR-201)
|
42600686-42648733 | protein_coding | ||
|
ENSG00000232354 (VIPR1-AS1) VIPR1 antisense RNA 1 |
ENST00000452639 (VIPR1-AS1-001)
|
42506650-42533231 | antisense | |
|
ENST00000593611 (VIPR1-AS1-008)
|
42516727-42532062 | antisense | ||
|
ENST00000593621 (VIPR1-AS1-007)
|
42513605-42532062 | antisense | ||
|
ENST00000596630 (VIPR1-AS1-005)
|
42512094-42532062 | antisense | ||
|
ENST00000598837 (VIPR1-AS1-003)
|
42506692-42532062 | antisense | ||
|
ENST00000600342 (VIPR1-AS1-002)
|
42506524-42532062 | antisense | ||
|
ENST00000601312 (VIPR1-AS1-006)
|
42512184-42532062 | antisense | ||
|
ENST00000602176 (VIPR1-AS1-004)
|
42509305-42532062 | antisense | ||
|
ENST00000608869 (VIPR1-AS1-009)
|
42532021-42533258 | antisense | ||
|
ENST00000610022 (VIPR1-AS1-010)
|
42532029-42533257 | antisense | ||
| CIL_000480_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000032528-ENSMUSG00000061536 | CGP | 10090 | 9:121642716-121705490 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000032528 (Vipr1) vasoactive intestinal peptide receptor 1 |
ENSMUST00000035115 (Vipr1-001)
|
121642716-121672954 | protein_coding | |
|
ENSMUST00000129394 (Vipr1-003)
|
121664615-121665907 | retained_intron | ||
|
ENSMUST00000139189 (Vipr1-002)
|
121643051-121660225 | processed_transcript | ||
|
ENSMUST00000149959 (Vipr1-004)
|
121668713-121669509 | retained_intron | ||
|
ENSMUSG00000061536 (Sec22c) SEC22 vesicle trafficking protein homolog C (S. cerevisiae) |
ENSMUST00000078547 (Sec22c-201)
|
121680047-121705029 | protein_coding | |
|
ENSMUST00000111560 (Sec22c-001)
|
121683022-121705465 | protein_coding | ||
|
ENSMUST00000132733 (Sec22c-004)
|
121688198-121690473 | retained_intron | ||
|
ENSMUST00000139193 (Sec22c-003)
|
121684551-121704979 | nonsense_mediated_decay | ||
|
ENSMUST00000154978 (Sec22c-002)
|
121695616-121705490 | protein_coding | ||
Expression Patterns
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