C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: INO80 complex subunit B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115274 INO80B 9606 + 2:74455023-74457960 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000233331 INO80B-001 74455023-74457960 protein_coding
  ENST00000409493 INO80B-010 74455116-74457400 protein_coding
  ENST00000409917 INO80B-006 74455102-74457662 protein_coding
  ENST00000431187 INO80B-007 74455087-74457367 protein_coding
  ENST00000455562 INO80B-012 74455492-74457540 nonsense_mediated_decay
  ENST00000469849 INO80B-011 74455117-74457675 processed_transcript
  ENST00000471577 INO80B-004 74455108-74457371 retained_intron
  ENST00000473618 INO80B-008 74455109-74457427 retained_intron
  ENST00000494986 INO80B-005 74455100-74457375 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastLiverLungMuscleOvaryPlacentaTestisENST00000233331ENST00000431187ENST00000469849ENST00000471577ENST00000494986
Transcript ID Adipose Brain Breast Liver Lung Muscle Ovary Placenta Testis
ENST00000233331 13.286±0.00 2.144±0.00 1.399±0.00 N/A N/A 9.139±0.00 11.914±8.58 11.131±0.34 8.554±0.00
ENST00000431187 N/A N/A N/A N/A 1.879±0.00 N/A N/A N/A N/A
ENST00000469849 N/A N/A N/A N/A N/A N/A N/A N/A 9.419±0.00
ENST00000471577 N/A N/A N/A N/A 0.740±0.00 N/A N/A N/A N/A
ENST00000494986 N/A N/A N/A 1.582±0.00 N/A N/A 1.933±0.00 N/A 11.182±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0031011 IDA:IEA Ino80 complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062749 ino80b INO80 complex subunit B protein_coding Danio_rerio
ENSMUSG00000030034 Ino80b INO80 complex subunit B protein_coding Mus_musculus

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