C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INO80 complex subunit B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000233331 INO80B-001 ENSG00000115274 9606 + 2:74455023-74457960 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastMuscleOvaryPlacentaTestisENST00000233331
Transcript ID Adipose Brain Breast Muscle Ovary Placenta Testis
ENST00000233331 13.286±0.00 2.144±0.00 1.399±0.00 9.139±0.00 11.914±8.58 11.131±0.34 8.554±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0031011 IDA:IEA Ino80 complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113935 Ino80b-001 protein_coding Mus_musculus 0 1134
ENSMUST00000032109 Ino80b-201 protein_coding Mus_musculus 0 1003
ENSMUST00000143814 Ino80b-002 nonsense_mediated_decay Mus_musculus 0 795

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