C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysyl oxidase-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115318 LOXL3 9606 - 2:74532414-74555690 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264094 LOXL3-001 74532438-74553935 protein_coding
  ENST00000393937 LOXL3-002 74533130-74553958 protein_coding
  ENST00000409249 LOXL3-005 74532604-74552647 protein_coding
  ENST00000409549 LOXL3-004 74533253-74553084 protein_coding
  ENST00000409986 LOXL3-003 74533728-74553961 protein_coding
  ENST00000413469 LOXL3-007 74536711-74555690 protein_coding
  ENST00000420535 LOXL3-009 74535644-74549459 protein_coding
  ENST00000470907 LOXL3-006 74532414-74549663 retained_intron
  ENST00000481835 LOXL3-008 74535289-74549576 processed_transcript
  ENST00000484369 LOXL3-010 74539793-74552647 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungOvaryPlacentaTestisENST00000264094ENST00000409249ENST00000409549ENST00000470907
Transcript ID Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000264094 N/A N/A N/A 0.989±0.00 N/A N/A 10.279±0.00 N/A
ENST00000409249 2.889±1.26 8.964±0.00 3.384±0.00 N/A 2.047±0.00 N/A N/A 11.156±2.23
ENST00000409549 N/A N/A N/A 1.356±0.00 N/A N/A N/A N/A
ENST00000470907 N/A N/A N/A N/A N/A 1.255±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001837 IDA epithelial to mesenchymal transition
GO:0004720 NAS protein-lysine 6-oxidase activity
GO:0005044 IEA scavenger receptor activity
GO:0005507 NAS:IEA copper ion binding
GO:0005515 IPI protein binding
GO:0005576 IDA extracellular region
GO:0005634 TAS nucleus
GO:0005737 IEA cytoplasm
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0016641 IEA oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039563 loxl3b lysyl oxidase-like 3b protein_coding Danio_rerio
ENSDARG00000076306 loxl3a lysyl oxidase-like 3a protein_coding Danio_rerio
ENSMUSG00000000693 Loxl3 lysyl oxidase-like 3 protein_coding Mus_musculus

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