C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysyl oxidase-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264094 LOXL3-001 ENSG00000115318 9606 - 2:74532438-74553935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaENST00000264094
Transcript ID Liver Placenta
ENST00000264094 0.989±0.00 10.279±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001837 IDA epithelial to mesenchymal transition
GO:0004720 NAS protein-lysine 6-oxidase activity
GO:0005044 IEA scavenger receptor activity
GO:0005507 NAS:IEA copper ion binding
GO:0005515 IPI protein binding
GO:0005576 IDA extracellular region
GO:0005634 TAS nucleus
GO:0005737 IEA cytoplasm
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0016641 IEA oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000707 Loxl3-001 protein_coding Mus_musculus 0 3230
ENSMUST00000101257 Loxl3-002 protein_coding Mus_musculus 0 1175
ENSMUST00000155502 Loxl3-004 retained_intron Mus_musculus 0 518
ENSMUST00000152679 Loxl3-003 processed_transcript Mus_musculus 0 440
ENSMUST00000113963 Htra2-004 protein_coding Mus_musculus 0 322
ENSMUST00000089645 Htra2-001 protein_coding Mus_musculus 0 322
ENSMUST00000113962 Htra2-002 protein_coding Mus_musculus 0 322
ENSMUST00000122955 Htra2-003 nonsense_mediated_decay Mus_musculus 0 313
ENSMUST00000154829 Htra2-006 retained_intron Mus_musculus 0 305
ENSMUST00000132099 Htra2-008 nonsense_mediated_decay Mus_musculus 0 274
ENSMUST00000134606 Htra2-007 protein_coding Mus_musculus 0 224
ENSMUST00000144058 Htra2-009 retained_intron Mus_musculus 0 213

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