C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin domain containing 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115514 TXNDC9 9606 - 2:99318982-99340702 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264255 TXNDC9-001 99318982-99336462 protein_coding
  ENST00000409434 TXNDC9-002 99321534-99336333 protein_coding
  ENST00000409705 TXNDC9-004 99322111-99340702 protein_coding
  ENST00000422767 TXNDC9-009 99319508-99333242 nonsense_mediated_decay
  ENST00000434323 TXNDC9-006 99322063-99336385 protein_coding
  ENST00000438680 TXNDC9-008 99321944-99336333 nonsense_mediated_decay
  ENST00000463385 TXNDC9-003 99321561-99336310 retained_intron
  ENST00000465183 TXNDC9-007 99332762-99336356 retained_intron
  ENST00000477337 TXNDC9-005 99336337-99340696 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264255
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264255 6.816±0.00 14.570±0.00 4.414±0.00 8.024±0.00 8.667±2.14 8.673±2.89 5.162±2.37 13.496±8.23 5.053±0.32 6.544±0.21 4.235±1.27 16.518±5.06 7.906±0.79 11.358±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000349 CIL_000349_0001 CGP 2:99284238-99340702
CIL_000348 CIL_000348_0001 CGP 2:99318982-99401326

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0008150 ND biological_process
GO:0030496 IEA midbody
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069853 txndc9 thioredoxin domain containing 9 protein_coding Danio_rerio
ENSMUSG00000058407 Txndc9 thioredoxin domain containing 9 protein_coding Mus_musculus

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