C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000349_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144214-ENSG00000115514 CGP 9606 2:99284238-99340702
GeneTranscriptPositionBiotype
ENSG00000115514 (TXNDC9)
thioredoxin domain containing 9 		ENST00000264255 (TXNDC9-001) 99318982-99336462 protein_coding
ENST00000409434 (TXNDC9-002) 99321534-99336333 protein_coding
ENST00000409705 (TXNDC9-004) 99322111-99340702 protein_coding
ENST00000422767 (TXNDC9-009) 99319508-99333242 nonsense_mediated_decay
ENST00000434323 (TXNDC9-006) 99322063-99336385 protein_coding
ENST00000438680 (TXNDC9-008) 99321944-99336333 nonsense_mediated_decay
ENST00000463385 (TXNDC9-003) 99321561-99336310 retained_intron
ENST00000465183 (TXNDC9-007) 99332762-99336356 retained_intron
ENST00000477337 (TXNDC9-005) 99336337-99340696 processed_transcript
ENSG00000144214 (LYG1)
lysozyme G-like 1 		ENST00000308528 (LYG1-001) 99284238-99301176 protein_coding
ENST00000409448 (LYG1-002) 99284257-99304742 protein_coding
ENSG00000158417 (EIF5B)
eukaryotic translation initiation factor 5B 		ENST00000289371 (EIF5B-001) 99337353-99401326 protein_coding
ENST00000470023 (EIF5B-002) 99397047-99399774 retained_intron
ENST00000470868 (EIF5B-003) 99389607-99390690 retained_intron
ENST00000494190 (EIF5B-004) 99394809-99399197 retained_intron
ENST00000617677 (EIF5B-201) 99337371-99400265 protein_coding
CIL_000349_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026085-ENSMUSG00000058407 CGP 10090 1:37946736-37997208
GeneTranscriptPositionBiotype
ENSMUSG00000026085 (Lyg1)
lysozyme G-like 1 		ENSMUST00000027254 (Lyg1-001) 37946736-37957759 protein_coding
ENSMUST00000114894 (Lyg1-201) 37946738-37957759 protein_coding
ENSMUST00000144184 (Lyg1-002) 37946736-37948999 processed_transcript
ENSMUSG00000058407 (Txndc9)
thioredoxin domain containing 9 		ENSMUST00000162031 (Txndc9-201) 37983867-37997208 protein_coding
ENSMUSG00000087374 (Gm15457)
predicted gene 15457 		ENSMUST00000129513 (Gm15457-001) 37933596-37954136 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000349_0001ENSG00000115514ENST00000264255ENST00000409434ENST00000409705ENST00000422767ENST00000434323ENST00000438680ENST00000463385ENST00000465183ENST00000477337ENSG00000144214ENST00000308528ENST00000409448ENSG00000158417ENST00000289371ENST00000470023ENST00000470868ENST00000494190ENST00000617677CIL_000349_0002ENSMUSG00000026085ENSMUST00000027254ENSMUST00000114894ENSMUST00000144184ENSMUSG00000058407ENSMUST00000162031ENSMUSG00000087374ENSMUST00000129513
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000349_0001ENSG00000115514ENST00000264255ENSG00000144214ENST00000308528ENST00000409448ENSG00000158417ENST00000289371ENST00000617677CIL_000349_0002ENSMUSG00000026085ENSMUST00000027254ENSMUST00000114894ENSMUST00000144184ENSMUSG00000058407ENSMUST00000162031ENSMUSG00000087374ENSMUST00000129513
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115514 ENST00000264255 6.816±0.00 14.570±0.00 4.414±0.00 8.024±0.00 8.667±2.14 8.673±2.89 5.162±2.37 13.496±8.23 5.053±0.32 6.544±0.21 4.235±1.27 16.518±5.06 7.906±0.79 11.358±0.00
ENST00000409434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144214 ENST00000308528 0.028±0.00 N/A 0.573±0.00 0.200±0.00 0.213±0.00 0.976±0.00 N/A 7.573±7.46 0.270±0.00 0.208±0.00 N/A 0.266±0.21 0.224±0.12 1.066±0.33
ENST00000409448 N/A N/A N/A 0.076±0.00 0.382±0.00 N/A 0.090±0.00 N/A N/A N/A N/A 0.694±0.15 N/A 1.843±1.70
ENSG00000158417 ENST00000289371 N/A N/A N/A 0.668±0.00 1.348±0.00 N/A N/A 1.006±0.00 1.276±0.00 1.634±0.00 0.805±0.00 7.559±6.11 9.980±0.00 N/A
ENST00000470023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617677 17.167±0.00 15.833±0.00 1.184±0.00 10.814±0.00 2.032±0.00 1.274±0.00 7.714±7.04 N/A N/A N/A N/A 9.719±5.51 4.223±0.08 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026085 ENSMUST00000027254 N/A 0.153±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114894 N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A 4.218±0.93 N/A 0.235±0.12 N/A 0.048±0.00
ENSMUST00000144184 N/A N/A N/A 0.044±0.00 0.428±0.26 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058407 ENSMUST00000162031 2.382±0.69 2.316±0.55 3.471±0.50 7.705±2.99 1.339±0.58 3.139±0.70 1.951±0.14 3.244±0.73 4.372±2.75 2.566±0.86 1.455±0.15 3.295±2.11 6.736±2.10 4.480±0.15
ENSMUSG00000087374 ENSMUST00000129513 0.022±0.00 0.032±0.01 0.003±0.00 0.007±0.01 0.010±0.00 0.022±0.00 0.007±0.00 N/A 0.007±0.01 0.015±0.00 N/A 0.032±0.02 0.006±0.00 0.042±0.02

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