C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115616 SLC9A2 9606 + 2:102619707-102711318 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000233969 SLC9A2-001 102619707-102711318 protein_coding
  ENST00000467657 SLC9A2-003 102684298-102686768 retained_intron
  ENST00000469286 SLC9A2-002 102689694-102702451 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000233969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000233969 0.006±0.00 0.014±0.00 1.137±0.00 0.306±0.19 0.282±0.11 4.753±4.32 0.074±0.00 2.097±0.00 0.050±0.00 0.637±0.23 0.029±0.02 0.006±0.00 1.366±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QU CIL_0004QU_0001 CGP 2:102473303-102711318
CIL_0004QT CIL_0004QT_0001 CGP 2:102619707-102736888

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006812 IEA cation transport
GO:0006814 IEA sodium ion transport
GO:0006885 IEA regulation of pH
GO:0008104 IEA protein localization
GO:0015299 IEA solute:proton antiporter activity
GO:0015385 IEA sodium:proton antiporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 TAS:IEA transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058780 slc9a2 solute carrier family 9 (sodium/hydrogen exchanger), member 2 protein_coding Danio_rerio
ENSMUSG00000026062 Slc9a2 solute carrier family 9 (sodium/hydrogen exchanger), member 2 protein_coding Mus_musculus

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