C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004QT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115616-ENSG00000135953 CGP 9606 2:102619707-102736888
GeneTranscriptPositionBiotype
ENSG00000115616 (SLC9A2)
solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2 		ENST00000233969 (SLC9A2-001) 102619707-102711318 protein_coding
ENST00000467657 (SLC9A2-003) 102684298-102686768 retained_intron
ENST00000469286 (SLC9A2-002) 102689694-102702451 processed_transcript
ENSG00000135953 (MFSD9)
major facilitator superfamily domain containing 9 		ENST00000258436 (MFSD9-001) 102715840-102736854 protein_coding
ENST00000411991 (MFSD9-002) 102718814-102736878 nonsense_mediated_decay
ENST00000421966 (MFSD9-006) 102726918-102736888 nonsense_mediated_decay
ENST00000428085 (MFSD9-005) 102719004-102732340 nonsense_mediated_decay
ENST00000437075 (MFSD9-004) 102717571-102736878 nonsense_mediated_decay
ENST00000438943 (MFSD9-003) 102717038-102736878 nonsense_mediated_decay
ENST00000462099 (MFSD9-007) 102732286-102736839 retained_intron
ENST00000496253 (MFSD9-008) 102715840-102718334 processed_transcript
CIL_0004QT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026062-ENSMUSG00000041945 CGP 10090 1:40681712-40790687
GeneTranscriptPositionBiotype
ENSMUSG00000026062 (Slc9a2)
solute carrier family 9 (sodium/hydrogen exchanger), member 2 		ENSMUST00000027231 (Slc9a2-201) 40681712-40768885 protein_coding
ENSMUSG00000041945 (Mfsd9)
major facilitator superfamily domain containing 9 		ENSMUST00000039672 (Mfsd9-001) 40772038-40790663 protein_coding
ENSMUST00000131390 (Mfsd9-002) 40772041-40790687 nonsense_mediated_decay
ENSMUST00000144385 (Mfsd9-003) 40781230-40790657 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QT_0001ENSG00000115616ENST00000233969ENST00000467657ENST00000469286ENSG00000135953ENST00000258436ENST00000411991ENST00000421966ENST00000428085ENST00000437075ENST00000438943ENST00000462099ENST00000496253CIL_0004QT_0002ENSMUSG00000026062ENSMUST00000027231ENSMUSG00000041945ENSMUST00000039672ENSMUST00000131390ENSMUST00000144385
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QT_0001ENSG00000115616ENST00000233969ENSG00000135953ENST00000258436ENST00000411991ENST00000421966ENST00000437075ENST00000438943ENST00000462099CIL_0004QT_0002ENSMUSG00000026062ENSMUST00000027231ENSMUSG00000041945ENSMUST00000039672ENSMUST00000131390
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115616 ENST00000233969 0.006±0.00 0.014±0.00 1.137±0.00 0.306±0.19 0.282±0.11 4.753±4.32 0.074±0.00 2.097±0.00 N/A 0.050±0.00 0.637±0.23 0.029±0.02 0.006±0.00 1.366±0.48
ENST00000467657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135953 ENST00000258436 1.026±0.00 0.718±0.00 N/A N/A 1.645±0.00 N/A N/A N/A 0.528±0.00 N/A N/A 0.540±0.32 0.981±0.34 0.567±0.00
ENST00000411991 N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A 0.470±0.00 N/A N/A N/A N/A
ENST00000421966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.806±0.00
ENST00000428085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437075 N/A N/A 0.434±0.00 N/A 0.788±0.00 0.555±0.00 N/A N/A N/A 0.217±0.00 0.181±0.09 0.568±0.00 0.480±0.09 0.491±0.00
ENST00000438943 0.645±0.00 0.595±0.00 N/A 0.173±0.00 N/A N/A 0.010±0.00 N/A N/A N/A 0.162±0.00 0.714±0.00 0.395±0.00 N/A
ENST00000462099 N/A N/A N/A N/A N/A N/A N/A 2.568±0.00 N/A N/A N/A N/A N/A N/A
ENST00000496253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026062 ENSMUST00000027231 0.225±0.04 0.154±0.08 2.361±0.18 0.440±0.50 1.721±1.39 77.893±19.12 1.716±0.13 11.498±3.74 0.012±0.01 1.620±0.35 6.908±2.45 1.298±0.63 1.159±1.05 3.107±1.18
ENSMUSG00000041945 ENSMUST00000039672 1.820±0.19 2.714±0.57 1.090±0.30 1.002±0.23 1.538±0.26 8.274±1.72 0.266±0.10 6.291±1.01 0.667±0.31 1.453±0.19 0.178±0.05 2.961±0.75 1.323±0.33 5.151±1.76
ENSMUST00000131390 0.254±0.04 0.449±0.03 N/A N/A 0.183±0.00 0.881±0.00 0.090±0.00 N/A 0.083±0.00 N/A 0.165±0.04 0.397±0.07 N/A N/A
ENSMUST00000144385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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