C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ornithine decarboxylase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115758 ODC1 9606 - 2:10439968-10448504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000234111 ODC1-001 10439968-10448504 protein_coding
  ENST00000405333 ODC1-002 10440601-10447780 protein_coding
  ENST00000443218 ODC1-003 10444544-10447788 protein_coding
  ENST00000446285 ODC1-004 10444095-10448309 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000234111ENST00000405333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000234111 1.615±0.00 4.224±0.00 N/A 1.806±0.50 3.235±0.38 23.091±0.00 1.464±0.00 3.825±0.00 2.943±1.74 2.268±0.32 10.220±3.40 11.973±10.08 1.752±0.02 30.619±9.27
ENST00000405333 N/A N/A 2.877±0.00 1.516±0.00 1.810±0.00 3.505±0.15 2.241±0.00 N/A 2.963±0.00 N/A N/A N/A N/A 42.035±21.49

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001822 IEA kidney development
GO:0003824 IEA catalytic activity
GO:0004586 ISS ornithine decarboxylase activity
GO:0005575 ND cellular_component
GO:0005737 ISS cytoplasm
GO:0005829 TAS cytosol
GO:0006521 TAS regulation of cellular amino acid metabolic process
GO:0006595 TAS polyamine metabolic process
GO:0006596 IEA polyamine biosynthetic process
GO:0008284 IEA positive regulation of cell proliferation
GO:0009615 IEP response to virus
GO:0033387 ISS putrescine biosynthetic process from ornithine
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042176 ISS regulation of protein catabolic process
GO:0042803 ISS protein homodimerization activity
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007377 odc1 ornithine decarboxylase 1 protein_coding Danio_rerio
ENSMUSG00000011179 Odc1 ornithine decarboxylase, structural 1 protein_coding Mus_musculus

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