C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116039 ATP6V1B1 9606 + 2:70935882-70965406 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000234396 ATP6V1B1-001 70935882-70965397 protein_coding
  ENST00000412314 ATP6V1B1-005 70935921-70965401 protein_coding
  ENST00000432098 ATP6V1B1-006 70943578-70960077 protein_coding
  ENST00000432367 ATP6V1B1-004 70935902-70965406 nonsense_mediated_decay
  ENST00000433895 ATP6V1B1-010 70963622-70965119 protein_coding
  ENST00000454446 ATP6V1B1-007 70943374-70961032 protein_coding
  ENST00000463380 ATP6V1B1-008 70957771-70959966 retained_intron
  ENST00000495118 ATP6V1B1-009 70959939-70961820 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000234396ENST00000412314ENST00000432098ENST00000432367ENST00000433895ENST00000454446ENST00000463380ENST00000495118
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000234396 N/A N/A 4.407±0.00 N/A 4.358±0.00 N/A 0.019±0.00 33.212±0.00 3.237±0.00 N/A 1.130±0.77 26.558±1.59 0.130±0.00
ENST00000412314 N/A 0.103±0.00 N/A 0.102±0.00 N/A 0.135±0.00 N/A N/A 0.018±0.00 0.079±0.00 N/A N/A 0.149±0.00
ENST00000432098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.469±0.00 N/A N/A
ENST00000432367 0.138±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433895 0.130±0.00 N/A N/A N/A 2.982±0.00 N/A N/A N/A 3.094±0.00 N/A N/A N/A N/A
ENST00000454446 N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.489±0.00 N/A 0.198±0.00
ENST00000495118 0.121±0.00 0.300±0.00 3.410±0.00 0.187±0.00 0.890±0.00 N/A 0.030±0.00 N/A N/A N/A 0.690±0.00 N/A 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003C4 CIL_0003C4_0001 CGP 2:70900590-70965406

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001503 IMP ossification
GO:0005524 IEA ATP binding
GO:0005737 ISS cytoplasm
GO:0005829 TAS cytosol
GO:0005902 ISS microvillus
GO:0006879 TAS cellular iron ion homeostasis
GO:0006885 IMP regulation of pH
GO:0007588 IMP excretion
GO:0007605 IMP sensory perception of sound
GO:0008286 TAS insulin receptor signaling pathway
GO:0015078 ISS hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 IMP:IEA proton transport
GO:0016020 IEA membrane
GO:0016323 ISS basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0016328 ISS lateral plasma membrane
GO:0016471 IMP vacuolar proton-transporting V-type ATPase complex
GO:0016820 IEA hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0032403 IEA protein complex binding
GO:0033178 IEA proton-transporting two-sector ATPase complex, catalytic domain
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0033572 TAS transferrin transport
GO:0042472 IMP inner ear morphogenesis
GO:0045851 IMP pH reduction
GO:0046034 IEA ATP metabolic process
GO:0051701 TAS interaction with host
GO:0055074 IMP calcium ion homeostasis
GO:0055085 TAS transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013443 atp6v1ba ATPase, H+ transporting, lysosomal, V1 subunit B, member a protein_coding Danio_rerio
ENSMUSG00000006269 Atp6v1b1 ATPase, H+ transporting, lysosomal V1 subunit B1 protein_coding Mus_musculus

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